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hat-trie
An efficient trie implementation.mk
make remadefastq-tools
Small utilities for working with fastq sequence files.coitrees
A very fast interval tree data structureJudo.jl
A Julia document generatorisolator
Rapid and robust analysis of RNA-Seq experiments.colormake
colorize GNU make outputpolee
Analyzing RNA-Seq with approximate likelihoodsubsample
Randomly sample lines from massive text files efficientlyRecursiveSparseBlocks.jl
julia interface to the librsb sparse matrix libraryproseg
Probabilistic cell segmentation for in situ spatial transcriptomicsSkia.jl
Experimental skia bindingsseqbias
An R package to correct for sequence bias in RNA-Seq experiments.Switch.jl
A C-style switch statement for Juliafastlog
A faster, reduced-precision logarithm function.vanity
scRNA-Seq normalization for the vaincbgb
computational biology grab-bag: messy one-off scripts for a variety of tasksZlib.jl
zlib bindings for Juliamaxspin
Quantifying spatial information in spatial transcriptomicsPoleeClassifier.jl
color.jl
Pretty colors for Juliasls
Stochastic L-Systems in PythonShowoff.jl
Nicely format an array of n things for tables and plotsLazySequences.jl
Lazy sequences.ragel-julia
A Julia backend for Ragelgtf-parse-off
Experiments with parsing gene transfer formatulam-death-spiral
Exposing the depravity of the natural numbers.isolator-paper
The Isolator Paperseqsim
A simplistic RNA-Seq simulator.vim-mk
Vim syntax for mkAnnDatas.jl
Julia compatibility for the anndata python modulequip-paper
A paper describing and evaluating the quip compression algorithm.HATTries.jl
julia hat-trie bindingsGatedLinearNetworks.jl
A gaussian gated linear networks implementationgadfly-static-html
Static HTML documentation for Gadflydotfiles
peakolator
World's fastest genomic segmentation algorithm.quip-website
A very simple website for quip.julia-minimalist-vim
Alternate vim syntax definitions for Juliapeakolator-legacy
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