• Stars
    star
    1
  • Language
    JavaScript
  • Created almost 12 years ago
  • Updated over 11 years ago

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

Static HTML documentation for Gadfly

More Repositories

1

hat-trie

An efficient trie implementation.
C
252
star
2

mk

make remade
Go
170
star
3

fastq-tools

Small utilities for working with fastq sequence files.
C
114
star
4

coitrees

A very fast interval tree data structure
Rust
111
star
5

quip

Compressing next-generation sequencing data with extreme prejudice.
C
78
star
6

Judo.jl

A Julia document generator
Julia
57
star
7

proseg

Probabilistic cell segmentation for in situ spatial transcriptomics
Rust
44
star
8

isolator

Rapid and robust analysis of RNA-Seq experiments.
C
32
star
9

colormake

colorize GNU make output
Python
30
star
10

polee

Analyzing RNA-Seq with approximate likelihood
Julia
26
star
11

subsample

Randomly sample lines from massive text files efficiently
C
17
star
12

RecursiveSparseBlocks.jl

julia interface to the librsb sparse matrix library
Julia
16
star
13

Skia.jl

Experimental skia bindings
Julia
11
star
14

seqbias

An R package to correct for sequence bias in RNA-Seq experiments.
C++
10
star
15

fastlog

A faster, reduced-precision logarithm function.
C
8
star
16

Switch.jl

A C-style switch statement for Julia
Julia
8
star
17

vanity

scRNA-Seq normalization for the vain
Python
7
star
18

cbgb

computational biology grab-bag: messy one-off scripts for a variety of tasks
C
6
star
19

Zlib.jl

zlib bindings for Julia
Julia
6
star
20

maxspin

Quantifying spatial information in spatial transcriptomics
Jupyter Notebook
5
star
21

PoleeClassifier.jl

Julia
5
star
22

color.jl

Pretty colors for Julia
Julia
5
star
23

sls

Stochastic L-Systems in Python
Python
5
star
24

Showoff.jl

Nicely format an array of n things for tables and plots
Julia
5
star
25

LazySequences.jl

Lazy sequences.
Julia
4
star
26

ragel-julia

A Julia backend for Ragel
C++
4
star
27

SpuriousCoexpression.jl

Benchmarking tool for spatial transcriptomics segmentation
Julia
3
star
28

ulam-death-spiral

Exposing the depravity of the natural numbers.
CoffeeScript
3
star
29

isolator-paper

The Isolator Paper
Jupyter Notebook
3
star
30

gtf-parse-off

Experiments with parsing gene transfer format
Ragel in Ruby Host
3
star
31

seqsim

A simplistic RNA-Seq simulator.
C++
2
star
32

vim-mk

Vim syntax for mk
Vim Script
2
star
33

AnnDatas.jl

Julia compatibility for the anndata python module
Julia
2
star
34

quip-paper

A paper describing and evaluating the quip compression algorithm.
C
2
star
35

HATTries.jl

julia hat-trie bindings
Julia
1
star
36

GatedLinearNetworks.jl

A gaussian gated linear networks implementation
Julia
1
star
37

dotfiles

Vim Script
1
star
38

peakolator

World's fastest genomic segmentation algorithm.
C
1
star
39

Stepwell.jl

Julia
1
star
40

quip-website

A very simple website for quip.
JavaScript
1
star
41

peakolator-legacy

Some old code.
C++
1
star
42

julia-minimalist-vim

Alternate vim syntax definitions for Julia
Vim Script
1
star