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hat-trie
An efficient trie implementation.mk
make remadefastq-tools
Small utilities for working with fastq sequence files.coitrees
A very fast interval tree data structurequip
Compressing next-generation sequencing data with extreme prejudice.Judo.jl
A Julia document generatorisolator
Rapid and robust analysis of RNA-Seq experiments.colormake
colorize GNU make outputpolee
Analyzing RNA-Seq with approximate likelihoodsubsample
Randomly sample lines from massive text files efficientlyRecursiveSparseBlocks.jl
julia interface to the librsb sparse matrix librarySkia.jl
Experimental skia bindingsseqbias
An R package to correct for sequence bias in RNA-Seq experiments.fastlog
A faster, reduced-precision logarithm function.Switch.jl
A C-style switch statement for Juliavanity
scRNA-Seq normalization for the vaincbgb
computational biology grab-bag: messy one-off scripts for a variety of tasksZlib.jl
zlib bindings for Juliamaxspin
Quantifying spatial information in spatial transcriptomicsPoleeClassifier.jl
color.jl
Pretty colors for Juliasls
Stochastic L-Systems in PythonShowoff.jl
Nicely format an array of n things for tables and plotsLazySequences.jl
Lazy sequences.ragel-julia
A Julia backend for RagelSpuriousCoexpression.jl
Benchmarking tool for spatial transcriptomics segmentationulam-death-spiral
Exposing the depravity of the natural numbers.isolator-paper
The Isolator Papergtf-parse-off
Experiments with parsing gene transfer formatseqsim
A simplistic RNA-Seq simulator.vim-mk
Vim syntax for mkAnnDatas.jl
Julia compatibility for the anndata python modulequip-paper
A paper describing and evaluating the quip compression algorithm.HATTries.jl
julia hat-trie bindingsGatedLinearNetworks.jl
A gaussian gated linear networks implementationgadfly-static-html
Static HTML documentation for Gadflydotfiles
peakolator
World's fastest genomic segmentation algorithm.Stepwell.jl
quip-website
A very simple website for quip.peakolator-legacy
Some old code.julia-minimalist-vim
Alternate vim syntax definitions for JuliaLove Open Source and this site? Check out how you can help us