Discover @dcjones Open Source projects

Daniel C. Jones (@dcjones)

dcjones

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Global Rank 28,658 (Top 1.0 %)
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Registered over 14 years ago
Most used languages

Julia
34.9 %

C
20.9 %

C++
9.3 %

Vim Script
7.0 %

Python
7.0 %

Rust
4.7 %

Jupyter Notebook
4.7 %

JavaScript
4.7 %

Ragel in Ruby Host 2.3 %

CoffeeScript
2.3 %

Go
2.3 %
Location 🇺🇸 United States
Country Total Rank 8,924
Country Ranking

Ragel in Ruby Host 1

Julia
82

C
652

Rust
876

Go
1,665

Vim Script
1,705

CoffeeScript
1,975

C++
7,957

Jupyter Notebook
9,848

hat-trie

An efficient trie implementation.

mk

fastq-tools

Small utilities for working with fastq sequence files.

coitrees

A very fast interval tree data structure

quip

Compressing next-generation sequencing data with extreme prejudice.

Judo.jl

A Julia document generator

proseg

Probabilistic cell segmentation for in situ spatial transcriptomics

isolator

Rapid and robust analysis of RNA-Seq experiments.

colormake

colorize GNU make output

polee

Analyzing RNA-Seq with approximate likelihood

subsample

Randomly sample lines from massive text files efficiently

RecursiveSparseBlocks.jl

julia interface to the librsb sparse matrix library

Skia.jl

Experimental skia bindings

seqbias

An R package to correct for sequence bias in RNA-Seq experiments.

fastlog

A faster, reduced-precision logarithm function.

Switch.jl

A C-style switch statement for Julia

vanity

scRNA-Seq normalization for the vain

cbgb

computational biology grab-bag: messy one-off scripts for a variety of tasks

Zlib.jl

zlib bindings for Julia

maxspin

Quantifying spatial information in spatial transcriptomics

Jupyter Notebook

PoleeClassifier.jl

color.jl

Pretty colors for Julia

sls

Stochastic L-Systems in Python

Showoff.jl

Nicely format an array of n things for tables and plots

LazySequences.jl

Lazy sequences.

ragel-julia

A Julia backend for Ragel

SpuriousCoexpression.jl

Benchmarking tool for spatial transcriptomics segmentation

ulam-death-spiral

Exposing the depravity of the natural numbers.

isolator-paper

The Isolator Paper

Jupyter Notebook

gtf-parse-off

Experiments with parsing gene transfer format

Ragel in Ruby Host

seqsim

A simplistic RNA-Seq simulator.

vim-mk

Vim syntax for mk

AnnDatas.jl

Julia compatibility for the anndata python module

quip-paper

A paper describing and evaluating the quip compression algorithm.

HATTries.jl

julia hat-trie bindings

GatedLinearNetworks.jl

A gaussian gated linear networks implementation

gadfly-static-html

Static HTML documentation for Gadfly

dotfiles

peakolator

World's fastest genomic segmentation algorithm.

Stepwell.jl

quip-website

A very simple website for quip.

peakolator-legacy

julia-minimalist-vim

Alternate vim syntax definitions for Julia