• Stars
    star
    1
  • Language
    Rust
  • License
    The Unlicense
  • Created over 3 years ago
  • Updated over 3 years ago

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

Small tool to clean up delimited data to make it consumable by standard unix tools

More Repositories

1

hck

A sharp cut(1) clone.
Rust
691
star
2

crabz

Like pigz, but rust
Rust
325
star
3

gzp

Multi-threaded Compression
Rust
156
star
4

perbase

Per-base per-nucleotide depth analysis
Rust
114
star
5

cargo-bundle-licenses

Generate a THIRDPARTY file with all licenses in a cargo project.
Rust
86
star
6

rust-lapper

Rust implementation of a fast, easy, interval tree library nim-lapper
Rust
55
star
7

nython

Build Python Extension Modules for Nim libraries.
Python
52
star
8

ponim

Nim + Python + Poetry = :)
Python
32
star
9

rumi

Rust UMI Directional Adjacency Deduplicator
Rust
14
star
10

ripline

Fast by-line reader from ripgrep
Rust
12
star
11

bam-builder

Wrapper over rust-htslib for building collections of BAM records for testing.
Rust
11
star
12

bioinfo_benchmarks

Language benchmarks that are important for Bioinformatics scripting
Nim
6
star
13

ExtraMojo

A library of nice to have things not found in the current mojo stdlib
Mojo
6
star
14

proglog

Simple, thread-safe, counter based progress logging
Rust
5
star
15

lapper.cr

Crystal port of nim-lapper: a fast genomic intervals query library
Crystal
5
star
16

timfmt

A small utility for formatting things the way Tim prefers.
Rust
4
star
17

nimedlib

Nim wrapper for the Edlib library
Nim
4
star
18

readfq

A packaged version of readfq implementation for reading fastq and fastq formatted files.
Go
3
star
19

ScAIList

Rust implementation of an Augmented Interval List, with a scaling factor.
Rust
2
star
20

dot

data over time
Rust
2
star
21

esc

Small CLI for escaping and unescaping characters in strings
Rust
2
star
22

interval_bakeoff

Test tool for different interval libraries
Rust
2
star
23

scivs

Collection of Data Structures for working with genomic intervals
Scala
2
star
24

ny_lapper

Python wrapper around nim-lapper using nython. Currently just a POC
Nim
1
star
25

ivtools

Rust lib for genomic interval tools.
Rust
1
star
26

aoc-2023

Rust
1
star
27

basebits

A memory efficient encoding for short DNA sequences and some associated operations.
Rust
1
star
28

we-bt

Rust
1
star
29

mash

Mash files together
Rust
1
star
30

IntervalLapper.jl

Julia implementation of nim-lapper, a fast and easy interval library tailored for genomic data.
Julia
1
star
31

aoc-lisp-rs

A Lisp to use for Advent of Code, written in Rust
1
star