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hck
A sharp cut(1) clone.crabz
Like pigz, but rustgzp
Multi-threaded Compressionperbase
Per-base per-nucleotide depth analysiscargo-bundle-licenses
Generate a THIRDPARTY file with all licenses in a cargo project.rust-lapper
Rust implementation of a fast, easy, interval tree library nim-lappernython
Build Python Extension Modules for Nim libraries.ponim
Nim + Python + Poetry = :)rumi
Rust UMI Directional Adjacency Deduplicatorripline
Fast by-line reader from ripgrepbam-builder
Wrapper over rust-htslib for building collections of BAM records for testing.bioinfo_benchmarks
Language benchmarks that are important for Bioinformatics scriptingExtraMojo
A library of nice to have things not found in the current mojo stdlibproglog
Simple, thread-safe, counter based progress logginglapper.cr
Crystal port of nim-lapper: a fast genomic intervals query librarytimfmt
A small utility for formatting things the way Tim prefers.nimedlib
Nim wrapper for the Edlib libraryreadfq
A packaged version of readfq implementation for reading fastq and fastq formatted files.ScAIList
Rust implementation of an Augmented Interval List, with a scaling factor.dot
data over timeesc
Small CLI for escaping and unescaping characters in stringsinterval_bakeoff
Test tool for different interval librariesscivs
Collection of Data Structures for working with genomic intervalsny_lapper
Python wrapper around nim-lapper using nython. Currently just a POCivtools
Rust lib for genomic interval tools.basebits
A memory efficient encoding for short DNA sequences and some associated operations.we-bt
mash
Mash files togethercleanse
Small tool to clean up delimited data to make it consumable by standard unix toolsIntervalLapper.jl
Julia implementation of nim-lapper, a fast and easy interval library tailored for genomic data.aoc-lisp-rs
A Lisp to use for Advent of Code, written in RustLove Open Source and this site? Check out how you can help us