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3DUX-Net
SLANTbrainSeg
Deep Whole Brain Segmentation Using SLANT MethodSynSeg-Net
SynSeg-Net: Synthetic Segmentation Without Target Modality Ground TruthSynb0-DISCO
Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-mapsPreQual
An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI imagespyPheWAS
MASI Lab Implementation of PheWAS in PythonUNesT
The official Pytorch implementation of UNesTSynBOLD-DisCo
Synthetic BOLD images for distortion correction of fMRI without additional calibration scansdeform-uxnet
S-EFOV
S-EFOV: Thoracic CT-based Body Composition Analysis with Semantically Extended FOVtumor-cifar
cornn_tractography
Convolutional-recurrent neural networks approximate diffusion tractography from T1-weighted MRI and associated anatomical contextregistration_tutorial
Step by step instructions for body/thorax registrationSSNet
Splenomegaly Segmentation NetworkRepUX-Net
ALARM
C-SliceGen
DeepLungIPN
N-GSBSS
Improved Gray Matter Surface based Spatial Statistics (N-GSBSS) in Neuroimaging StudiesQA_tool
DA_CT_muscle_seg
WM_learning_release
lmsignatures
tbi_ct_lesion_segmentation
MaCRUISE
coarse_to_fine_prior_seg
mxdrnn_examplecode
This is the example code of the paper MXDRNNDeepLungScreening
EmphysemaSeg
tractem
Support code for Whole Brain Protocol for Tractography with Empirical MRI (TractEM)GSBSS
Gray matter Surface Based Spatial StatisticsDCC_CL
lvo-window-adjustment
HARFI_Scripts
HARFI processingON_segmentation
Segmentation of the Optic Nerve in MRISTrUDeL
Streamline Tractography Utilities for Deep LearningContainerized_DAX
Capstone_WhiteMatterML
Interpretable machine learning approach to identifying white matter brain differences between healthy aging and Alzheimer’s onset through diffusion tensor imaging

ComparativeCalibration
Comparative Study of Confidence CalibrationDeepOpenLung
DeepN4
AR_Mirror_Muscle_Demo_Clean
Clean muscle demo for the Adventure Science Center (Summer 2019)spie_2020_mtcsd_dl
This Repository contains the code that was written for the proposition of learning MT-CSD multi-shell FOD reconstruction from single shell DW-MRIDeepOpenLung_simple
Organ_Surface_Rendering
EigenThorax
Build tools for feature learning in thorax CT spaceDAPIArtifactRemoval
AtlasToDiffusionReg
singularity to register an atlas to the diffusion space of a subjectAugmented-Reality-Programming-Challenge-Walkthrough
For this maker challenge, students explore augmented reality (AR) physiology programs, including muscle and bone overlays and body tracking recording program, using Unity and Microsoft Visual Studio.ADSP_AutoQA
Automated QA for ADSP processingSLANTbrainSeg_TICV
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