• Stars
    star
    3
  • Rank 3,943,854 (Top 79 %)
  • Language
    MATLAB
  • License
    MIT License
  • Created over 6 years ago
  • Updated almost 5 years ago

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

Support code for Whole Brain Protocol for Tractography with Empirical MRI (TractEM)

More Repositories

1

3DUX-Net

Python
236
star
2

SLANTbrainSeg

Deep Whole Brain Segmentation Using SLANT Method
Python
106
star
3

SynSeg-Net

SynSeg-Net: Synthetic Segmentation Without Target Modality Ground Truth
Python
64
star
4

Synb0-DISCO

Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
Python
57
star
5

PreQual

An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images
Python
41
star
6

pyPheWAS

MASI Lab Implementation of PheWAS in Python
Python
26
star
7

UNesT

The official Pytorch implementation of UNesT
Python
16
star
8

S-EFOV

S-EFOV: Thoracic CT-based Body Composition Analysis with Semantically Extended FOV
13
star
9

SynBOLD-DisCo

Synthetic BOLD images for distortion correction of fMRI without additional calibration scans
Python
13
star
10

tumor-cifar

Python
11
star
11

deform-uxnet

Python
11
star
12

registration_tutorial

Step by step instructions for body/thorax registration
C++
10
star
13

cornn_tractography

Convolutional-recurrent neural networks approximate diffusion tractography from T1-weighted MRI and associated anatomical context
Python
10
star
14

SSNet

Splenomegaly Segmentation Network
Python
9
star
15

RepUX-Net

Python
8
star
16

ALARM

7
star
17

C-SliceGen

Python
7
star
18

N-GSBSS

Improved Gray Matter Surface based Spatial Statistics (N-GSBSS) in Neuroimaging Studies
MATLAB
7
star
19

QA_tool

Jupyter Notebook
6
star
20

Pandora-WhiteMatterAtlas

6
star
21

DA_CT_muscle_seg

Python
6
star
22

DeepLungIPN

Python
6
star
23

WM_learning_release

Python
6
star
24

lmsignatures

Python
5
star
25

tbi_ct_lesion_segmentation

Jupyter Notebook
5
star
26

MaCRUISE

3
star
27

coarse_to_fine_prior_seg

Python
3
star
28

mxdrnn_examplecode

This is the example code of the paper MXDRNN
Python
3
star
29

DeepLungScreening

Python
3
star
30

EmphysemaSeg

Python
3
star
31

GSBSS

Gray matter Surface Based Spatial Statistics
Shell
2
star
32

DCC_CL

Python
2
star
33

lvo-window-adjustment

Python
2
star
34

HARFI_Scripts

HARFI processing
MATLAB
2
star
35

ON_segmentation

Segmentation of the Optic Nerve in MRI
MATLAB
2
star
36

STrUDeL

Streamline Tractography Utilities for Deep Learning
Python
1
star
37

Containerized_DAX

Python
1
star
38

Capstone_WhiteMatterML

Interpretable machine learning approach to identifying white matter brain differences between healthy aging and Alzheimer’s onset through diffusion tensor imaging


Jupyter Notebook
1
star
39

ComparativeCalibration

Comparative Study of Confidence Calibration
Python
1
star
40

DeepOpenLung

Jupyter Notebook
1
star
41

DeepN4

Jupyter Notebook
1
star
42

AR_Mirror_Muscle_Demo_Clean

Clean muscle demo for the Adventure Science Center (Summer 2019)
C#
1
star
43

spie_2020_mtcsd_dl

This Repository contains the code that was written for the proposition of learning MT-CSD multi-shell FOD reconstruction from single shell DW-MRI
Python
1
star
44

DeepOpenLung_simple

Python
1
star
45

Organ_Surface_Rendering

Python
1
star
46

EigenThorax

Build tools for feature learning in thorax CT space
Python
1
star
47

DAPIArtifactRemoval

Shell
1
star
48

AtlasToDiffusionReg

singularity to register an atlas to the diffusion space of a subject
Jupyter Notebook
1
star
49

Augmented-Reality-Programming-Challenge-Walkthrough

For this maker challenge, students explore augmented reality (AR) physiology programs, including muscle and bone overlays and body tracking recording program, using Unity and Microsoft Visual Studio.
1
star
50

SLANTbrainSeg_TICV

MATLAB
1
star