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3DUX-Net
SLANTbrainSeg
Deep Whole Brain Segmentation Using SLANT MethodSynSeg-Net
SynSeg-Net: Synthetic Segmentation Without Target Modality Ground TruthPreQual
An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI imagespyPheWAS
MASI Lab Implementation of PheWAS in PythonUNesT
The official Pytorch implementation of UNesTSynBOLD-DisCo
Synthetic BOLD images for distortion correction of fMRI without additional calibration scansdeform-uxnet
S-EFOV
S-EFOV: Thoracic CT-based Body Composition Analysis with Semantically Extended FOVtumor-cifar
cornn_tractography
Convolutional-recurrent neural networks approximate diffusion tractography from T1-weighted MRI and associated anatomical contextregistration_tutorial
Step by step instructions for body/thorax registrationSSNet
Splenomegaly Segmentation NetworkRepUX-Net
ALARM
C-SliceGen
DeepLungIPN
N-GSBSS
Improved Gray Matter Surface based Spatial Statistics (N-GSBSS) in Neuroimaging StudiesQA_tool
Pandora-WhiteMatterAtlas
DA_CT_muscle_seg
WM_learning_release
lmsignatures
tbi_ct_lesion_segmentation
MaCRUISE
coarse_to_fine_prior_seg
mxdrnn_examplecode
This is the example code of the paper MXDRNNDeepLungScreening
EmphysemaSeg
tractem
Support code for Whole Brain Protocol for Tractography with Empirical MRI (TractEM)GSBSS
Gray matter Surface Based Spatial StatisticsDCC_CL
lvo-window-adjustment
HARFI_Scripts
HARFI processingON_segmentation
Segmentation of the Optic Nerve in MRISTrUDeL
Streamline Tractography Utilities for Deep LearningContainerized_DAX
Capstone_WhiteMatterML
Interpretable machine learning approach to identifying white matter brain differences between healthy aging and Alzheimer’s onset through diffusion tensor imaging

ComparativeCalibration
Comparative Study of Confidence CalibrationDeepOpenLung
DeepN4
AR_Mirror_Muscle_Demo_Clean
Clean muscle demo for the Adventure Science Center (Summer 2019)spie_2020_mtcsd_dl
This Repository contains the code that was written for the proposition of learning MT-CSD multi-shell FOD reconstruction from single shell DW-MRIDeepOpenLung_simple
Organ_Surface_Rendering
EigenThorax
Build tools for feature learning in thorax CT spaceDAPIArtifactRemoval
AtlasToDiffusionReg
singularity to register an atlas to the diffusion space of a subjectAugmented-Reality-Programming-Challenge-Walkthrough
For this maker challenge, students explore augmented reality (AR) physiology programs, including muscle and bone overlays and body tracking recording program, using Unity and Microsoft Visual Studio.ADSP_AutoQA
Automated QA for ADSP processingSLANTbrainSeg_TICV
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