• Stars
    star
    144
  • Rank 250,176 (Top 6 %)
  • Language
    Python
  • License
    Apache License 2.0
  • Created about 6 years ago
  • Updated about 5 years ago

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

A system for generating training labels via natural language explanations

A Python implementation of Babble Labble, a framework for creating training data via natural language explanations.
Presented at NIPS 2017 (demo) and ACL 2018 (paper).

Getting Started

About Babble Labble

The main idea behind Babble Labble is that when annotators label training sets, there are reasons behind each label. With Babble Labble, we collect those reasons as natural language explanations, which are then converted via semantic parser into labeling functions, executable functions which can be used to automatically label additional data. When many such labeling functions are combined, training sets of sufficient size and quality can be generated to train classifiers with reasonable performance, despite utilizing only a small number of user inputs (e.g., tens of explanations instead of thousands of individual labels).

In the larger picture, we envision systems like Babble Labble serving as higher-level "supervision compilers" for the Software 2.0 systems of the future. Babble Labble is just one of many projects exploring how weak supervision sources can be used to train machine learning systems. Related works include:

  • Snorkel: The flagship system for data programming with user-provided labeling functions
  • Snorkel MeTaL: Extends Snorkel to multi-task learning settings and includes a data programming formulation with better scaling properties
  • Reef: Automatically generates labeling functions from a small labeled dataset
  • Coral: Improves the label aggregation process by inferring generative model structure via static analysis of labeling functions

You can find links to papers, repositories, and blog posts on the Snorkel landing page.

Disclaimer

The code in this repository is very much research code, a proof of concept. There are many ways it could be improved, optimized, made more user-friendly, etc. Unfortunately, we do not have the manpower to provide ongoing support and have no plans to publish further updates. However, the individual components of the framework are readily available in other applications with better ongoing support:

  • semantic parser: The SEMPRE toolkit makes it easy to build semantic parsers for new tasks in flexible ways, and SippyCup (which the Babble Labble parser was built on) has some nice tutorials. If you want to use a trained neural semantic parser, many open source variants exist.
  • filter bank: The simple filters described in the paper can each be expressed with just a few lines of code, and are by no means comprehensive. Refer to the paper for details.
  • label aggregator: The LabelModel class in Snorkel-MeTaL provides the latest implementation of a data programming engine for aggregating noisy weak supervision sources.

There's nothing special about our particular implementation of this pipeline; the power is in the combination of a tools that allows high-level inputs to be converted into weak supervision resources, and a way to use those resources to ultimately train a model. Since the interfaces between the components are all simply labels---a label matrix between the semantic parser/filter bank and label aggregator, and a set of training labels from the label aggregator to the discriminative model---the framework is fairly modular.

References

@article{hancock2018babble,
  title={Training Classifiers with Natural Language Explanations},
  author={Hancock, Braden and Varma, Paroma and Wang, Stephanie and Bringmann, Martin and Liang, Percy and R{\'e}, Christopher},
  booktitle = {Association for Computational Linguistics (ACL)},
  year={2018},
}

Hancock, B., Varma, P., Wang, S., Bringmann, M., Liang, P. and Ré, C. Training Classifiers with Natural Language Explanations. ACL 2018.

Setup

There are two ways to set up Babble Labble:

  • Option A: Docker
  • Option B: Local

The first step for both options is the same:
[0] Read the Disclaimer

Steps 4 & 5 are identical as well.

Option A: Docker

[1] Install Docker (instructions)

[2] Pull docker image:

docker pull bhancock8/babble

[3] Run docker container

docker run --rm -i -p 8080:8080 -t bhancock8/babble /bin/bash

Skip to Step 4.

Option B: Local

[1] Install Anaconda 3.6 (instructions)

[2] Clone the repository:

git clone https://github.com/HazyResearch/babble.git
cd babble

[3] Set up environment:

conda env create -f environment.yml
source activate babble
source add_to_path.sh

Continue to Step 4.

Options A & B

[4] Run unit tests:

nosetests

If the tests run successfully, you will see an "OK" printed at the end.
If you chose Option B, the first time you run this may take extra time to install a language model for spaCy.

[5] Run the tutorial:

If you'd like to try out the tutorials, continue on to the Tutorial README.

More Repositories

1

flash-attention

Fast and memory-efficient exact attention
Python
3,673
star
2

deepdive

DeepDive
Shell
1,949
star
3

state-spaces

Sequence Modeling with Structured State Spaces
Jupyter Notebook
1,372
star
4

ThunderKittens

Tile primitives for speedy kernels
Cuda
1,324
star
5

data-centric-ai

Resources for Data Centric AI
TeX
1,070
star
6

safari

Convolutions for Sequence Modeling
Assembly
841
star
7

meerkat

Creative interactive views of any dataset.
Python
814
star
8

hgcn

Hyperbolic Graph Convolutional Networks in PyTorch.
Python
556
star
9

ama_prompting

Ask Me Anything language model prompting
Python
530
star
10

hyena-dna

Official implementation for HyenaDNA, a long-range genomic foundation model built with Hyena
Assembly
528
star
11

m2

Repo for "Monarch Mixer: A Simple Sub-Quadratic GEMM-Based Architecture"
Assembly
507
star
12

H3

Language Modeling with the H3 State Space Model
Assembly
493
star
13

evaporate

This repo contains data and code for the paper "Language Models Enable Simple Systems for Generating Structured Views of Heterogeneous Data Lakes"
Python
467
star
14

manifest

Prompt programming with FMs.
Python
437
star
15

metal

Snorkel MeTaL: A framework for training models with multi-task weak supervision
Python
420
star
16

pdftotree

🌲 A tool for converting PDF into hOCR with text, tables, and figures being recognized and preserved.
Python
403
star
17

fonduer

A knowledge base construction engine for richly formatted data
Python
403
star
18

hyperbolics

Hyperbolic Embeddings
Python
364
star
19

flyingsquid

More interactive weak supervision with FlyingSquid
Python
310
star
20

legalbench

An open science effort to benchmark legal reasoning in foundation models
Python
282
star
21

KGEmb

Hyperbolic Knowledge Graph embeddings.
Python
242
star
22

flash-fft-conv

FlashFFTConv: Efficient Convolutions for Long Sequences with Tensor Cores
C++
242
star
23

aisys-building-blocks

Building blocks for foundation models.
242
star
24

bootleg

Self-Supervision for Named Entity Disambiguation at the Tail
Python
211
star
25

HypHC

Hyperbolic Hierarchical Clustering.
Python
186
star
26

TART

TART: A plug-and-play Transformer module for task-agnostic reasoning
Python
184
star
27

based

Code for exploring Based models from "Simple linear attention language models balance the recall-throughput tradeoff"
Python
178
star
28

fly

Python
174
star
29

tanda

Learning to Compose Domain-Specific Transformations for Data Augmentation
Python
169
star
30

spacetime

Code for SpaceTime 🌌⏱️. Proposed in Effectively Modeling Time Series with Simple Discrete State Spaces, ICLR 2023.
Python
156
star
31

butterfly

Butterfly matrix multiplication in PyTorch
Python
154
star
32

zoology

Understand and test language model architectures on synthetic tasks.
Python
149
star
33

hippo-code

Python
139
star
34

EmptyHeaded

Your worst case is our best case.
C++
136
star
35

domino

Python
133
star
36

blocking-tutorial

C++
127
star
37

mindbender

Tools for iterative knowledge base development with DeepDive
CoffeeScript
116
star
38

reef

Automatically labeling training data
Jupyter Notebook
103
star
39

fonduer-tutorials

A collection of simple tutorials for using Fonduer
Jupyter Notebook
100
star
40

fm_data_tasks

Foundation Models for Data Tasks
Python
92
star
41

TreeStructure

Table Extraction Tool
Jupyter Notebook
90
star
42

epoxy

Interactive Model Iteration with Weak Supervision and Pre-Trained Embeddings
Python
76
star
43

CaffeConTroll

C++
75
star
44

HoroPCA

Hyperbolic PCA via Horospherical Projections
Python
65
star
45

structured-nets

Structured matrices for compressing neural networks
Python
64
star
46

hidden-stratification

Combating hidden stratification with GEORGE
Jupyter Notebook
60
star
47

eclair-agents

Jupyter Notebook
50
star
48

numbskull

Numba-based version of DimmWitted Gibbs sampler
Python
45
star
49

model-patching

Model Patching: Closing the Subgroup Performance Gap with Data Augmentation
Python
42
star
50

cs145-notebooks-2016

Public materials for the Fall 2016 offering of CS145
Jupyter Notebook
35
star
51

skill-it

Skill-It! A Data-Driven Skills Framework for Understanding and Training Language Models
Jupyter Notebook
34
star
52

mandoline

(ICML 2021) Mandoline: Model Evaluation under Distribution Shift
Python
30
star
53

mongoose

A Learnable LSH Framework for Efficient NN Training
Python
28
star
54

thanos-code

Code release for the paper Perfectly Balanced: Improving Transfer and Robustness of Supervised Contrastive Learning
Python
28
star
55

tuffy

Tuffy, a Markov Logic Network solver
Java
23
star
56

snorkel-superglue

Applying Snorkel to SuperGLUE
Jupyter Notebook
23
star
57

ukb-cardiac-mri

Weakly Supervised MRI Series Classification for the UK Biobank
Python
22
star
58

correct-n-contrast

Official code repository for Correct-N-Contrast
Python
20
star
59

ludwig-benchmarking-toolkit

Ludwig benchmark
Python
19
star
60

ddlog

Compiler for writing DeepDive applications in a Datalog-like language — ⚠️🚧🛑 REPO MOVED TO DEEPDIVE 👇🏿
Scala
19
star
61

augmentation_code

Reproducible code for Augmentation paper
Python
18
star
62

smallfry

Python
18
star
63

tabi

Code release for Type-Aware Bi-Encoders for Open-Domain Entity Retrieval
Python
18
star
64

lp_rffs

Low precision random Fourier features for kernel approximation
Python
17
star
65

sampler

DimmWitted Gibbs Sampler in C++ — ⚠️🚧🛑 REPO MOVED TO DEEPDIVE 👉🏿
C++
17
star
66

random_embedding

Python
16
star
67

snorkel-biocorpus

Python
16
star
68

bazaar

JavaScript
14
star
69

ddbiolib

DeepDive Biomedical Tools
Python
13
star
70

anchor-stability

A study of the downstream instability of word embeddings
Jupyter Notebook
12
star
71

Omnivore

Omnivore Optimizer and Distributed CcT
C++
12
star
72

dd-genomics

The Genomics DeepDive project
Python
11
star
73

embroid

Embroid: Unsupervised Prediction Smoothing Can Improve Few-Shot Classification
Jupyter Notebook
11
star
74

dimmwitted

C++
10
star
75

medical-ned-integration

Cross-domain data integration for named entity disambiguation in biomedical text
Python
10
star
76

torchhalp

Python
9
star
77

cross-modal-ws-demo

HTML
9
star
78

liger

Liger: Fusing Weak Supervision and Model Embeddings
Python
8
star
79

treedlib

Jupyter Notebook
8
star
80

Accelerated-PCA

Accelerated Stochastic Power Iteration with Momentum
Jupyter Notebook
8
star
81

hyperE

HTML
7
star
82

chinstrap

C++
6
star
83

ivy-tutorial

An Introductory Tutorial for Ivy
Jupyter Notebook
6
star
84

quadrature-features

Code to generate kernel features using Gaussian quadrature
Python
5
star
85

icij-maude

Weakly supervised classification of adverse event reports from the FDA's MAUDE database.
Python
5
star
86

observational

Observational Supervision for Medical Image Classification using Gaze Data
Jupyter Notebook
5
star
87

librarian

DeepDive Librarian for managing all data sets we publish and receive
Python
3
star
88

halp

Python
3
star
89

bert-pretraining

Python
2
star
90

d3m-model-search

D3M Model Search Component
Python
2
star
91

elementary

Data services and APIs
Python
1
star
92

dependency_model

Structure learning code from [ICML'19 paper](https://arxiv.org/abs/1903.05844)
Python
1
star