Tyler Chafin (@tkchafin)
github

tkchafin

Twitter logo Share LinkedIn logo Share Facebook logo Share
  • Stars
    star
    60
  • Global Rank 298,568 (Top 11 %)
  • Followers 15
  • Following 21
  • Registered over 9 years ago
  • Most used languages
    Python
         57.1 %
    Perl
         28.6 %
    C++
         7.1 %
    R
         7.1 %
  • Location πŸ‡¬πŸ‡§ United Kingdom
  • Country Total Rank 12,220
  • Country Ranking
    Perl
         126
    R
         1,562
    Python
         3,235
    C++
         5,619

Top repositories

1

mrbait

Pipeline for universal design of target-enrichment probes from various sources of genomic data.
Python
19
star
2

scripts

Random scripts, mostly for dealing with RADseq data and DNA sequence alignments
Perl
13
star
3

fragmatic

Simple program for in silico restriction digest of genomic sequences, to simulate RAD-family NGS library prep methods
Perl
6
star
4

vcf2msa.py

Package for writing multiple sequence alignments of pseudo-references from a VCF file with a reference genome
Python
6
star
5

FGTpartitioner

Parsimonious delimitation of large SNP datasets using the four gamete test
Python
4
star
6

ConsGen2018

Repository for the Spring 2018 course in Conservation Genetics (BIOL-5174) at the University of Arkansas
Perl
2
star
7

resistnet

Code for riverscape genetics - examining patterns of genetic differentiation in dendritic networks
Python
2
star
8

polyrad_scripts

Scripts for working with inputs and outputs of polyRAD genotyper
Python
2
star
9

newhyb_pipeline

Perl
1
star
10

douglas_lab_adapters

Repository for designing our RAD and UCE adapters.
Python
1
star
11

birds

Python
1
star
12

mpi-bucky

A parallel implementation of BUCKy using OpenMPI message passing interface
C++
1
star
13

ClinePlotR

Plot Genomic Clines from BGC and INTROGRESS and Correlate with Environental Variables
R
1
star
14

udapc

experiments in unsupervised discriminant analysis of principal components for population genomics
Python
1
star