Discover @roblanf Open Source projects

@roblanf

roblanf

Stars
522
Global Rank 55,626 (Top 2 %)
Followers 132
Following 1
Registered over 13 years ago
Most used languages

Python
42.9 %

R
28.6 %

Shell
21.4 %

Jupyter Notebook
7.1 %
Location 🇦🇺 Australia
Country Total Rank 986
Country Ranking

R
22

Shell
105

Python
1,244

Jupyter Notebook
1,953

minion_qc

Quality control for MinION sequencing data

sangeranalyseR

functions to analyse sanger sequencing reads in R

sarscov2phylo

Global phylogenies of SARS-CoV-2 sequences

phypapers

How to set up a literature bot on Bluesky

BenchmarkAlignments

Benchmark empirical datasets for phylogenetic method development

minion_multiQC

multi-tool QC for minion data

raspberrytrap

Reputable-Open-Access-Journals

a subjective list of open access journals that have good reputations

euc_qc

quality control shell scripts for mapping short-read sequencing data to distant reference genomes

pcurver

R functions to analyse distributions of p values

SRHtests

tests of stationarity, reversibility, and homogeneity for sequence alignments

pvalues

code to extract p values from open access papers

treemaker

make smaller trees out of bigger ones, doing smart stuff along the way

AIPhylo

machine learning for phylogenetics

DS4B2023

Data Science for Biologists 2023

communitree

analysis of community assembly using phylogenetics in R

netcaster

Python framework for evolving neural network architectures

Jupyter Notebook

phylofunctions

a collection of often very basic functions for phylogenetic utilities in Python