roblanf/DS4B2023 roblanf/DS4B2023

  • Stars
    star
    2
  • Language
  • Created over 1 year ago
  • Updated over 1 year ago
Twitter logo Share LinkedIn logo Share Facebook logo Share
roblanf/DS4B2023
github

roblanf

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

Data Science for Biologists 2023

More Repositories

1

minion_qc

Quality control for MinION sequencing data
R
210
star
2

sangeranalyseR

functions to analyse sanger sequencing reads in R
R
96
star
3

sarscov2phylo

Global phylogenies of SARS-CoV-2 sequences
Shell
86
star
4

phypapers

How to set up a literature bot on Bluesky
72
star
5

BenchmarkAlignments

Benchmark empirical datasets for phylogenetic method development
Python
16
star
6

minion_multiQC

multi-tool QC for minion data
Shell
10
star
7

raspberrytrap

5
star
8

Reputable-Open-Access-Journals

a subjective list of open access journals that have good reputations
4
star
9

euc_qc

quality control shell scripts for mapping short-read sequencing data to distant reference genomes
Shell
4
star
10

pcurver

R functions to analyse distributions of p values
R
3
star
11

SRHtests

tests of stationarity, reversibility, and homogeneity for sequence alignments
Python
3
star
12

pvalues

code to extract p values from open access papers
Python
3
star
13

treemaker

make smaller trees out of bigger ones, doing smart stuff along the way
Python
3
star
14

AIPhylo

machine learning for phylogenetics
Python
2
star
15

communitree

analysis of community assembly using phylogenetics in R
R
1
star
16

netcaster

Python framework for evolving neural network architectures
Jupyter Notebook
1
star
17

phylofunctions

a collection of often very basic functions for phylogenetic utilities in Python
Python
1
star