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SlicerVirtualReality
A Slicer extension that enables user to interact with a Slicer scene using virtual reality.dicom-anonymizer
Tool to anonymize DICOM files according to the DICOM standardITKUltrasound
ITK module with classes particularly useful for ultrasound.SlicerCustomAppTemplate
Template to be used as a starting point for creating a custom 3D Slicer applicationImageViewer
A lightweight, cross-platform 2D/3D medical image viewer.VTKPythonPackage
A setup script to generate VTK Python Wheelstensorboard-plugin-3d
ITKContourInterpolation
An implementation of morphological contour interpolationvtk.js-examples
These are a few examples for vtk.jsSlicerITKUltrasound
Ultrasound image formation, processing, and analysis. Interfaces built off the ITKUltrasound library.pyLAR
This repository contains python implementations on Low-rank-plus-sparse, Atlas-to-image Registration (pyLAR) framework and its applications in medical image analysis and computer vision.ITKPOCUS
An open source library for streaming and preprocessing point-of-care ultrasound video.CardiacUltrasoundPhaseEstimation
This repository contains an image-based instantaneous phase estimation method for gating and temporal super-resolution of cardiac ultrasoundDeprecated-VesselView
VesselView is a demonstration application from Kitware Inc for the segmentation, registration and analysis of tubes( e.g, blood vessels) in 3D images (e.g, MRI, CT and Ultrasound).KitwareFileViewers
Browser extension to open URL in Kitware online viewersCourseInBiomedicalImageAnalysisAndVisualization
Kitware Course in Biomedical Image Analysis and Visualization: ITKITKIOScanco
ITK Image IO for Scanco MicroCT .ISQ filesvtk-js-cinematic-rendering-internship-2022-experiments
Collection of vtk.js based cinematic rendering experiments.dicom-exporter
DICOM file converter in PythonSlicerCAT
Example Application for Slicer Customization - Generated from KitwareMedical/SlicerCustomAppTemplateITKStrain
ITK filters to estimate a strain tensor field from a displacement field or a spatial transformation.TubeTK-pypbm
Pattern-based morphometry for vascular analysis.IntersonArraySDKCxx
C++ Wrapper for the C# SDK for Interson's Linear Array ProbeOsteotomyPlanner
3D Slicer extension to visualize and plan an osteotomy surgery.SlicerNNUnet
3D Slicer nnUNet integration to streamline usage for nnUNet based AI extensions.HistologyCancerDiagnosisDeepPersistenceHomology
Cancer Diagnosis in Histology Images using Deep Learning and Persistence Homologypydstk
Python Dynamical Systems Toolkit.UltrasoundIntersonApps
Interactive ultrasound applications using streamed images from an Interson linear array probe.SlicerCBCTToothSegmentation
Slicer extension for automated segmentation of individual teeth in cone-beam CT dental scans using a deep-learning based approach.HASI
High-throughput Applications for Skeletal Imagingparaview-glance-py
An extended version of ParaView Glance that supports an integrated python server, e.g., for running ITK algorithms...2019-ImageXD-Registration-Tutorial
SlicerIMSTK
Extension for 3D slicer that enables user to prototype real-time multi-modal surgical simulation scenarios by leveraging iMSTKDeprecated-paraview-glance-cornerstone
A demonstration of Cornerstone.js integration into ParaView Glance. Current version is an integration of VTK.js and OHIF.itkARGUS-DARPA-POCUS_AI-Archive
SlicerSkeletalRepresentation
Collection of Skeletal Model Extensions for 3D Slicer/SlicerSALTVTKExternalModule
CMake buildsystem for externally building any built-in or remote VTK module outside of the VTK source tree.AnatomicAugmentedRealityProjector
lungair-desktop-application
Desktop application for AI-based BPD risk analysisDeprecated-vtkVolViewVessels
Archive of an initial implementation exploration for VTK.JS + Python. Working version is ParaviewGlancePyDeprecated-UltrasoundSpectroscopyRecorder
Slicer-CameraPath
Slicer module for Intelligent Virtual Surgical PlanningITKDICOM
Better support for DICOM in ITK.vtkColorCodedDepthVolume
Animate a sequence of NRRD volumes in VTKlungair-web-application
Web application based on VolView for AI-based BPD risk analysisSlicerMixedReality
A Slicer extension that enables user to interact with a Slicer scene using mixed reality headset.UltrasoundIntersonApps-USpectScripts
Focused Assessment with Sonography for TraumaITKRLEImage
Run-length encoded memory compression scheme for an itk::ImageSlicerLookingGlass
Extension for 3D slicer that enables user to visualize the 3D scene using the Looking Glass hardware display.Deprecated-pv-web-vessels
Vessel viewer and extractionIntersonSDKCxx
C++ Wrapper for the Interson C# SDKSlicerITKPython
A Slicer extension for ITK's Python wrapping.ShapeRegressionExtension
Computation and visualization of time-regressed shapes in a collection of 3D shape inputs associated to a linear variablehabet
HArmonization BEnchmarking Toolslicer-macos-codesign-scripts
macOS shell script to extract, codesign, and re-packsign a dmg package. Also create a pkg installer.MONAI-GettingStarted
SlicerQReads
Slicer-based implementation of QREADS medical image viewer used at Mayo ClinicAtlasBuilder
Utilities for creating functional boxplots of 1D dataIntersonManager
SOFA
Deprecated-SOViewer
Archive of an old library for viewing ITK Spatial Objects, Scenes, and suchBender
End-user application to manipulate voxelized anatomical models using an underlying armaturevtk-vue-starter
Starter repo for vtk.js and vue.jsSlicerPipelines
Pipelines are an extension for 3DSlicer that will offer the ability to create simple modules (aka pipelines) via a GUI interface with no coding knowledge needed.slicer-extensions-webapp
Source code of the site allowing to browse and download Slicer extensions. This site is published at extensions.slicer.org and maintained by @Kitware on behalf of the 3D Slicer community.vpaw
A surgical planning software system targeted to pediatric patients with airway obstruction.SlicerPythonTestRunner
Python test runner extension for 3D Slicer based on PyTest and PyTest JSON ReportITKHigherOrderAccurateGradient
http://www.insight-journal.org/browse/publication/775MTEC-Clarius-OpenIGTLink
ITKTubeTK-CTLungs
Methods for forming models of the vessels and airways of the lungsSlicerSRep2
Slicer extension defining MRML nodes and operations for Skeletal Representations (SReps)UltrasoundMeasurementExplorer
A C++ program for exploring properties of RF Ultrasound images in real timeitkARGUS
Anatomic Reconstruction for Generalizable UltraSound (ARGUS) AI: A library for point-of-care ultrasound AI using MONAI and ITKCleaver
steady
A Python-based workflow system with cachingDeprecated-ITKTubeTK-DashboardScripts
Archive of scripts used to test ITKTubeTK. Now ITKTubeTK exists as an ITK module, which provides its own testing infrastructureITKMultipleImageIterator
ITK remote module from an IJ article at http://www.insight-journal.org/browse/publication/915SlicerMarkupConstraints
Slicer module to enable Slicer extension developers to constrain and synchronize markups and control points of different nodes.Love Open Source and this site? Check out how you can help us