plops/hanser-phase-retrieval

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Created about 9 years ago
Updated about 9 years ago

plops/hanser-phase-retrieval

plops

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retrieve phase of high NA objective based on "Phase-retrieved pupil functions in wide-field fluorescence microscopy". Hanser BM1, Gustafsson MG, Agard DA, Sedat JW. See also code from original authors: conda install -c david-hoffman pyotf

cl-cpp-generator

another lisp library to generate c/c++ code. this one is supposed to be very simple. note that development of this repo has stopped. i am now working on a similar project in https://github.com/plops/cl-cpp-generator2

cl-cpp-generator2

Common Lisp s-expression code generator for C and C++ like languages. Examples for generating Cuda and Vulkan code.

ecl-termux-binary

This is a binary of ECL (embeddable common lisp) and should run on an Android Phone (aarch64) under termux.

clicc

from ftp://ftp.informatik.uni-kiel.de/pub/kiel/apply/

cl-pure-x11

pure lisp x client (directly write x11 requests to socket)

cl-v4l2

video4linux 2 bindings for sbcl

cl-cffi-gtk-from-repl

Tutorial how to incrementally develop a GTK application in Common Lisp

zemax

bacon_fb_test

Draw to the screen of a Oneplus One without Android HALs, this probably works on all Qualcom based smartphones

lisp-http

draw a map using javascript. you may be interested in https://github.com/plops/cl-aframe instead

cl-golang-generator

Common Lisp to convert s-expressions to go language (works for some examples)

cl-vhdl

This is an attempt of a common lisp domain specific language that emits VHDL for FPGA synthesis

cl-rust-adalm-pluto-glfw

visualize software defined radio with rust

cl-sdl2viewer

An image viewer for Common Lisp (using libSDL2)

cl-py-generator

generate python code from s-expressions (has been used for lots of data analysis code)

sb-x264

lisp (sbcl) binding for libx264

cl-pl2303

Common Lisp CFFI binding to libusb0 and control code for PL2303 USB to serial converter.

learn_py_iio

play with adalm-pluto

arduino_due_lisp

(Still very primitive) Port of FemtoLisp https://github.com/JeffBezanson/femtolisp to Arduino Due. A presentation on Google Docs is on https://docs.google.com/presentation/d/11Xp-iVxU3gnEur190BoI_FRhN7zAo0qJezp5BSRVDoM/edit?usp=sharing . I suggest you have a look at this alternative: http://www.ulisp.com

cl-js-generator

simple javascript sexpr syntax

testglfw

test cl-glfw, displays a 16 bit texture

cl-v4l2-tk

lisp video4linux and tk gui

fem

simple finite element solver

sb-libusb0

SBCL binding for libusb-0.x

led-strip

verilog code to control a ws2811 led strip using the ftdi morphic-II developement board (featuring ft2232h usb interface and cyclone II fpga)

hdfogl

load hdf and display with opengl

pocketbook360

My attempt to use an E-book readers E-ink display as output for my computer.

sb-hdf

lisp (sbcl) binding for libhdf5

cl-gaussfit

some code for STORM image reconstruction

cl-pdfscan

load a lot of pdfs into memory (lisp)

cl-elixir-generator

s-expression to elixir language converter

cl-fiber-prop

light propagation through optical multimode fibers

build_pluto_firmware

generate fpga bitstream and linux image for adalm pluto

cpp-interp2d

2d interpolation in c++

cl-gen-ispc-mandelbrot

Express the C code from https://ispc.github.io/example.html using s-expressions for https://github.com/plops/cl-cpp-generator

1isp-quadtree

quadtree from numerical recipes in lisp

cl-image-processing-intro

introduction to common lisp for image processing

sicp-logic

10mar11 event driven simulation from sicp in common lisp

sb-andor2-win

binding for Andor camera driver version 2, I use it for clara, in windows

cl-rust-generator

Common Lisp based converter from s-expressions to Rust language source code

cl-andor

9feb10 lisp binding for andor camera

abstract-b

some code for controlling mma, focus and camera

cl-data-pipes

transfer data and sync over pipes

lcos-cam-calib

lcos cam mapping, 1st with hough trafo

camera-calib-doc

doc for camera calibration

cl-gen-halide-test

try to generate code with halide-lang

cl-draw-svg-bezier

draw digits from a font given in svg (exported from inkscape)

matlab-hilo-sim

simulate hilo in matlab

c_net

v4l c capture and send over network to lisp gtk gui

satellite-plot

learn about copernicus sentinel satellite data

lens-doc

documentation on how to raytrace through high NA objective

cl-3d-screen

display a 3d opengl animation on a 3d tv using hdmi

cl-ics

Common Lisp binding for libics Image Cytometry Standard file reading and writing http://libics.sourceforge.net/

dokdok2012

cl-cubic-interp

cubic interpolation. i use this to speed up evaluation of bessel functions

kdtree-90

21jul10 experiments with kd tree

rgb_led_matrix

use ccl common lisp on raspberry pi to send imag data to arduino and display on a 16x16 ws2811 led array

glraw

memi-eps-pic-gen

create postscript drawing of mma for ssi

c-mera-ulisp

Let's see if I can convert ulisp into c-mera notation.

sb-siftfast

Common Lisp binding (sbcl) for libsiftfast image processing library

sb-nlopt

Common Lisp (SBCL) binding for nlopt http://ab-initio.mit.edu/wiki/index.php/NLopt a library for non-linear optimization

gauss-fit

wanted robust spot fitting but only implemented first step

dic-simul

process image with lut for gray values with dic method

cl-sicp-eval

its quite hard to port sicp eval to common lisp

dijk

11nov10 dijkstra algorithm

woropt-cyb-0628

x11-shm-test

xwindow shm display

cpp-worm-convolve

worm simulation, convolution, c++

lens

5sep10 objective even some doc

matlab-mma-resample-sim

simulate mma, with resampling

cl-gen-glfw

interact with opengl using my c++ generator https://github.com/plops/cl-cpp-generator

spiral-sample

spiral sampling

memi-alignment

document on how to align the memi device

cl-cad-stl-check

tried to debug an stl model for rapid prototyping

copernicus-radar

arduino

red enable processing for forthdd display

glfw

image display using glfw with stdio interface

mma-bla

pnmftscale

i want to have perfect interpolation for pnm images

satellite_hackathon

Copernicus Hackathon Leiden 2018

lisp-kdtree

thesis

outline, has picture

microman-sdl-slm

sdl slm device adapter for micromanager

cl-gen-cpp-wasm

experiment with Sexpression->C->wasm->browser toolchain

mma

microscope control code

plops-pages

Webpage giving an overview over all my projects

kmrcl

kevin rosenbergs code from http://git.b9.com/?p=kmrcl.git;a=summary

nd-array-ypnos

multi dimensional array processing (just some notes while i read the paper, not good)

cl-gen-drmgfx

generated c++ code to draw on linux console using drm

cl-depth-shader

ambient occlusion with shading language

cl-learn-cells

Try to understand Kenny Tilton's dataflow progamming extension for Common Lisp

bead-eval

some image processing

cl-bessel-fftw

fftw lisp binding and bessel evaluation

matlab-mma-sim

matlab code for mma simulation

cl-ogl-shader

shading language with lisp

youscope

analyze the wave from the youscope youtube video using opengl

cl-fm-radio-rds

decode german vhf fm radio (especially the digital rds channel)

array-type-dispatch

per pixel array operations in lisp based on a post from cyrus harmon

cl-week-calendar