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ggsignif
Easily add significance brackets to your ggplotsggupset
Combination matrix axis for 'ggplot2' to create 'UpSet' plotstidygenomics
Tidy Verbs for Dealing with Genomic Data Frames https://const-ae.github.io/tidygenomics/lemur
Latent Embedding Multivariate RegressionsparseMatrixStats
Implementation of the matrixStats API for sparse matricestransformGamPoi-Paper
transformGamPoi
Variance stabilizing transformation for Gamma Poisson distributed datamixdir
Cluster high dimensional categorical datasetsproDA
Protein Differential Abundance for Label-Free Mass Spectrometry https://const-ae.github.io/proDA/Neural_Network_DNA_Demo
Jupyter Notebook to demonstrate the use of Neural Networks for Transcription Factor Binding Site Predictioneinsum
Einstein Summation for Arrays in RpyLemur
A Python implementation of the LEMUR algorithm for analyzing multi-condition single-cell RNA-seq data.CoefExplainer
Understand How to Interpret the Coefficients of a Categorical Linear Modelmotif_plotter
A simple tool to create DNA motif plots based directly on matplotlib to enable construction of complex plotsCoronaDensity
HighlyReplicatedRNASeq
Collection of Bulk RNA-Seq Experiments With Many Replicatesggplot2_basics_to_extensions
Material from my talk "ggplot2: whistlestop tour from basics to extensions" at the Oxford R User group meetup.Multi-omics-Data-Integration-course
Temporary Repository for the EMBO 2024 Multi-Omics coursegggroupedscale
Grouped Discrete Scale for 'ggplot2'ggquadrilateral
A quadrilateral geom for ggplot2kmeansPoi
R package for K-means clustering of CountsproDD
Differential Detection for Label-free (LFQ) Mass Spec DataSkiingInSingapore
My solution for the coding challenge published by RedMart.transformGamPoi-ShinyApp
Source code for the Shiny App of Comparison of Transformations for Single-Cell RNA-Seq DataglmGamPoi-Paper
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