IPMI-ICNS-UKE/4d-cbct-mc

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IPMI-ICNS-UKE/4d-cbct-mc

IPMI-ICNS-UKE

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Monte Carlo simulation of (4D) cone beam computed tomography

gdl-fire-4d

General deep learning-based fast image registration framework for clinical thoracic 4D CT data

multiscale

Multi-scale CNNs for histopathology image segmentation

DeepTICI

Deep learning-based automated TICI (Thrombolysis In Cerebral Infarction) scoring for DSA-based assessment of mechanical thrombolysis response.

4d-cbct-boosting

respiratory-motion-prediction

patch-performance

Don't waste your time and money on inefficient patch-based inference!

sparsam

Deep Learning on SPARSely Annotated Medical-data

inference-patch-sampling

CAPUT

Repository for the CAPUT dataset

respiratory-signal-database

DARTS

A Ca2+ microdomain analysis pipeline for spatio-temporal microscopy imaging

crc1328-pythontutorial

Jupyter Notebook

TDEntropyDeconvolution

Spatio-temporal image restoration with entropy-based regularization for application to low-SNR fluorescence microscopy image series.

ICNS-CoLD

Matlab source code for the ICNS CoLD@2PM (Cortical Layer Discrimination in 2-Photon Microscopy data) project

VignettingCorrection

Single image-based vignetting correction for improving the consistency of neural activity analysis in 2-photon functional microscopy

Jurkat_cell_segmentation

First adoption of the reservoir paradigm for microscopy image data processing, here: T cell segmentation in live-cell Calcium image series.

MPI-DVR

3D Direct Volume Rendering (DVR) for real time-capable 3D visualization of Magnetic Particle Imaging (MPI) data