Seqera Labs (@seqeralabs)
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seqeralabs

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  • Stars
    star
    488
  • Global Org. Rank 23,808 (Top 8 %)
  • Registered over 5 years ago
  • Most used languages
    Nextflow     27.3 %
    Shell
         24.2 %
    Groovy
         12.1 %
    Java
         12.1 %
    HCL     6.1 %
    HTML
         6.1 %
    Python
         6.1 %
    CSS
         3.0 %
    MDX     3.0 %
  • Location 🇪🇸 Spain
  • Country Total Rank 877
  • Country Ranking
    Nextflow     4
    Groovy
         5
    MDX     25
    HCL     58
    Shell
         202
    Java
         262
    CSS
         391
    HTML
         716
    Python
         1,077

Top repositories

1

nf-tower

Nextflow Tower system
Groovy
140
star
2

tower-cli

Nextflow Tower CLI tool
Java
37
star
3

wave

On-demand containers provisioning service
Groovy
26
star
4

seqera-kit

Python implementation and field-tool for automated pipeline launching through Tower CLI (beta)
Python
22
star
5

wave-showcase

Examples showing how to configure Nextflow to run with Wave containers provisioning service
Nextflow
19
star
6

nf-k8s-best-practices

A best practices guide for Nextflow on Kubernetes
Shell
17
star
7

nf-training-advanced

Customer workshop materials
Nextflow
16
star
8

gatk4-germline-snps-indels

Workflow for germline short variant discovery using GATK4
Nextflow
12
star
9

showcase

Infrastructure as code implementation of the seqeralabs/showcase on Seqera
Shell
11
star
10

wave-cli

Command line tool for Wave containers provisioning service
Java
10
star
11

tower-agent

Agent app that allows connecting remote batch schedulers to Tower Cloud
Java
8
star
12

nf-dragen

POC Nextflow pipeline to run Illumina DRAGEN software
Nextflow
8
star
13

nf-tower-docs

Nextflow Tower Documentation
CSS
6
star
14

nf-sentieon

POC Nextflow pipeline to run Sentieon software
Nextflow
5
star
15

nf-tower-aws

Repository containing required policies for Nextflow Tower deployment on AWS
5
star
16

nf-aggregate

Pipeline to aggregate pertinent metrics across pipeline runs on the Seqera Platform (beta)
HTML
5
star
17

git-readme

An opinionated collection of Git one-liners
4
star
18

nf-canary

A minimal Nextflow workflow for testing infrastructure.
Nextflow
4
star
19

multi-projects

Sandbox for nextflow multi-project in Nextflow.
Nextflow
4
star
20

terraform-seqera-aws

HCL
4
star
21

conda-recipes

Conda recipes for the Eel project
Shell
3
star
22

logos

Seqera official logos
3
star
23

nf-training-intro

Nextflow
3
star
24

docker-sync

Script to sync a Docker repositories
Shell
2
star
25

tower-public-roadmap

The Tower public roadmap
2
star
26

nextflow-website

WORK IN PROGRESS - Nextflow website Hugo based
HTML
2
star
27

datasets-automation-blog

Repository for the Seqera Labs Workflow Automation for Nextflow Tower Pipelines blog post
Python
2
star
28

cx-field-tools-installer

Unofficial Terraform solution to help clients install Seqera Platform
HCL
2
star
29

xpack-google

Google extension package for Nextflow
2
star
30

platform-installer

Seqera Platform installer scripts
Shell
2
star
31

xpack-dnanexus

DNAnexus extension package for Nextflow
Shell
1
star
32

aws-s3-download

Bare minimal S3 download client for testing purpose
Java
1
star
33

event-handler-app-interview

A repository with a skeleton application for remote Interview
Groovy
1
star
34

nf-pipelines

Nextflow
1
star
35

nf-core-tower-azure-poc

Shell
1
star
36

setup-seqerakit

Github Action to set up seqerakit
1
star
37

docs

Source code for the Seqera documentation portal.
MDX
1
star
38

libseqera

Library for Java & Groovy modules shared across Seqera projects
Groovy
1
star
39

fusion-vs-mountpoint-benchmark

Benchmark suite to compare of Fusion, AWS Mountpoint and RClone
Shell
1
star