Michael Notter (@miykael)

Top repositories

1

3dprintyourbrain

How to 3D print your brain from a T1 MRI image.
Shell
389
star
2

nipype_tutorial

Learn Nipype with these tutorial notebooks - go here to see them online -->
Jupyter Notebook
120
star
3

gif_your_nifti

How to create fancy GIFs from an MRI brain image
Python
119
star
4

atlasreader

Python interface for generating coordinate tables and region labels from statistical MRI images
Jupyter Notebook
88
star
5

fmriflows

fmriflows is a consortium of many (dependent) fMRI analysis pipelines, including anatomical and functional pre-processing, univariate 1st and 2nd-level analysis, as well as multivariate pattern analysis.
MATLAB
60
star
6

workshop_pybrain

Jupyter Notebook
55
star
7

nipype-beginner-s-guide

Beginner's guide for Nipype
Python
37
star
8

parcellation_fragmenter

Fragments FreeSurfer parcellation annotation in N-equal sized parcels
Python
27
star
9

workshop_cambridge

Content for the workshop in Cambridge 2018
Jupyter Notebook
15
star
10

create_fake_fmri_results

Small Notebook to create fake fMRI results (for tutorial or class) - run it online at ->
Jupyter Notebook
6
star
11

noah_ages

Contains the code to create a fun gif in which Noah Kalina ages 20 years in 20 seconds.
Jupyter Notebook
6
star
12

traffic_info_github

Script to track github traffic (views and clones) over period of 14 days
Python
5
star
13

wallpaper_clouded_globe

This script generates a satellite image from the whole planet (with cloud coverage) from https://worldview.earthdata.nasa.gov that than can be used as a wallpaper
Shell
5
star
14

nipype_course

Python
4
star
15

nasa_earthdata

Collect different kinds of satellite images from https://worldview.earthdata.nasa.gov
Jupyter Notebook
4
star
16

LINEViewer

Python based EEG analysis tool that provides a rough data overview
Python
4
star
17

nipype_env

A Docker image for a basic nipype environment
Dockerfile
2
star
18

STEN

Statistical interface for EEG analysing
Python
2
star
19

pac2018

Collection of different approaches to tackle the PAC2018 challenge
Jupyter Notebook
1
star
20

pupillometryAnalyzer

The pupillometryAnalyzer script can be used to analyse pupillometry raw data saved in a wks-file. It analyzes the time-series of one or both eyes and creates informative csv- and png-outputs that can be used for further statistical analysis.
MATLAB
1
star
21

workshop_ino_03

Innovation workshop
Jupyter Notebook
1
star
22

miykael

1
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23

workshop_mumbai

Content for the workshop in Mumbai 2018
Jupyter Notebook
1
star
24

temporal_binding_window

These matlab scripts compute the temporal binding window (TBW) for a group of subject that participated in a behavioral multisensory integration study
MATLAB
1
star
25

xbar_screentime_tracker

Passive tracking of time spent in front of your screen (optimized for Mac OS X)
Python
1
star