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ij-ridgedetection
Detect ridges / lines with imagejTraJ
Library for diffusion trajectory analysisij-nl-means
Non local means filter for ImageJij-blob
ImageJ library to detect and analyse connected components (blobs) in binary imagesR-ClustMAPDP
Maximum a-posteriori Dirichlet Process Mixtures Clustering Algorithm for Rkdtree
KDTree implementation Simon Levyij-trajectory-classifier
This plugin segments and classify diffusion trajectoriesij-robust-split
Implementation of Kumar's et. al. "A rule-based approach for robust clump splitting" algorithm as ImageJ pluginij-nanotrackj
NanoTrackJ is an ImageJ/Fiji plugin to characterize the size of nanoparticles by its diffusion trajectories.r-diffusion-analysis
My scripts for diffusion analysisdocker-deeppicker
ij-particlesizer
ImageJ plugin to derive number based size distributions based on recorded TEM images. A focus of the development was to provide different splitting methods to handle agglomerates and aggregates, robust handling of different noise levels and adaptability to non-standard images.ij-ellipsesplit
ImageJ Plugin to split binary objects by ellipse fittingij-shape-filter
Shape Filter Plugin for ImageJij-trackmate-findmaxima
Find maxima detector for trackmate (module)ij-shape-smoothing
Shape Smoothing Plugin for ImageJij-r-plot
Small plugin to plot histograms and make basic fittings in ImageJ with RLove Open Source and this site? Check out how you can help us