sysbio-bioinf/yap-problog

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sysbio-bioinf/yap-problog

sysbio-bioinf

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Docker for YAP version of Problog

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Software for Analysis and Visualization of Alteration data

sputnik

Clojure library for parallelization of computations to distributed computation nodes.

McKmeans

A multi-core parallel implementation of the k-means cluster algorithm written in Clojure.

ProbRules

A language for rule-based modeling built on top of ProbLog, a probabilistic Prolog.

VennMaster

VennMaster: A tool for drawing area proportional Venn diagrams

CoCoV

CoCoV App for tracking adverse events after COVID vaccination

BNStatic

Prediction of dynamic impact nodes based on graph-based measures

HSC-boolean-network-model

R Scripts to simulate the Boolean network model of the HSC

BarcodesDesigner

Barcodes Designer: A toolkit for the design and optimization of barcode sets for Next Generation Sequencing libraries.

QuantumAttractorSearch

Jupyter notebook for running an attractor search in Boolean Networks using quantum computers

Jupyter Notebook

TraqBio

Flexible progress tracking for core unit projects

CTest

CTest: an online system to track COVID-19 test results

MOCCA

Multi-objective selection for collecting cluster alternatives

GatekeepR

R Shiny application for fast intervention target screening in Boolean networks

PanNET

Source code for the pancreatic neuroendocrine tumor model

Cantata

Code and Demo sources for CANTATA - inference of missing interactions in Boolean Networks

DynamicDriverSets

Scripts and demo for identifying dynamic driver sets to control phenotypical landscapes

IdeogramBrowser