pekrau/obsidian_utils

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1
Language
Python
License
MIT License
Created over 3 years ago
Updated about 3 years ago

pekrau/obsidian_utils

pekrau

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Utility scripts for Obsidian notes; e.g. convert to GitHub pages-friendly HTML.

MolScript

The MolScript program produces publication-quality images of macromolecular 3D structures.

CouchDB2

CouchDB v2.x Python 3 interface in a single module. Also a command line tool.

Publications

A web-based publications reference database system.

OrderPortal

A portal for orders (requests, project applications, etc) to a facility from its users.

BeerClub

A web application to keep track of the beer accounts for registered members.

samplesheet

A simple web service creating samplesheet CSV files for the Illumina HiSeq.

DbShare

Web service to share and query tabular data sets stored in SQLite3 databases.

genologics

Python interface to the GenoLogics LIMS server via its REST API. OBSOLETE: Use https://github.com/SciLifeLab/genologics

webapp-flask-sqlite3-template

userman

Simple user account handling system for use with web services. Built on top of Tornado and CouchDb.

DataGraphics

Serve datasets and graphics on the web using Vega-Lite graphics.

blobserver

Simple web app to server blobs (files containing any data) publicly. A file can be uploaded or updated by an authorized account, either via the web interface or via a script.

pekrau.github.io

My web site, now including the blog Civilisation (formerly at wordpress.com).

adhoc

Task-oriented web interface system to various bioinformatics tools.

wrapid

wrapid: Micro framework built on Python WSGI for RESTful server APIs

charon

Database for IGN projects and samples. OBSOLETE: Use https://github.com/NationalGenomicsInfrastructure/charon

jsondocdb

A Python Sqlite3 database for JSON documents. Simple indexing using JsonLogic.