pekrau/genologics

This repository has been archived on 17/Sep/2019
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Created over 12 years ago
Updated over 12 years ago

pekrau/genologics

pekrau

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Python interface to the GenoLogics LIMS server via its REST API. OBSOLETE: Use https://github.com/SciLifeLab/genologics

MolScript

The MolScript program produces publication-quality images of macromolecular 3D structures.

CouchDB2

CouchDB v2.x Python 3 interface in a single module. Also a command line tool.

Publications

A web-based publications reference database system.

OrderPortal

A portal for orders (requests, project applications, etc) to a facility from its users.

BeerClub

A web application to keep track of the beer accounts for registered members.

samplesheet

A simple web service creating samplesheet CSV files for the Illumina HiSeq.

DbShare

Web service to share and query tabular data sets stored in SQLite3 databases.

webapp-flask-sqlite3-template

userman

Simple user account handling system for use with web services. Built on top of Tornado and CouchDb.

DataGraphics

Serve datasets and graphics on the web using Vega-Lite graphics.

blobserver

Simple web app to server blobs (files containing any data) publicly. A file can be uploaded or updated by an authorized account, either via the web interface or via a script.

pekrau.github.io

My web site, now including the blog Civilisation (formerly at wordpress.com).

adhoc

Task-oriented web interface system to various bioinformatics tools.

wrapid

wrapid: Micro framework built on Python WSGI for RESTful server APIs

obsidian_utils

Utility scripts for Obsidian notes; e.g. convert to GitHub pages-friendly HTML.

charon

Database for IGN projects and samples. OBSOLETE: Use https://github.com/NationalGenomicsInfrastructure/charon

jsondocdb

A Python Sqlite3 database for JSON documents. Simple indexing using JsonLogic.