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PyDESeq2
A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.FLamby
Cross-silo Federated Learning playground in Python. Discover 7 real-world federated datasets to test your new FL strategies and try to beat the leaderboard.HistoSSLscaling
Code associated to the publication: Scaling self-supervised learning for histopathology with masked image modeling, A. Filiot et al., MedRxiv (2023). We publicly release Phikon πHE2RNA_code
Train a model to predict gene expression from histology slides.GrAIdient
GrAIdient is a deep learning framework that aims at challenging the way we train and run models.DSB2017
Data Science Bowl 2017 : Lung Cancer Detectiongrad-cnns
Code and manuscript for "Efficient Per-Example Gradient Computations in Convolutional Neural Networks"charts
Helm charts maintained by Owkinscancovia
idash-2020
iDASH 2020 - Owkin submissionfedeca
Code repository associated with the FedECA articleSRATTA
Implementation of the SRATTA paperbenchmark_flamby
This is an example to showcase how one can use benchopt in combination with FLamby in order to be able to create and share reproducible reports about performance of new FL strategies.hte
EUCAIM_Substra_demo
Substra demo for EUCAIM projectdrl-evaluation
Robust evaluation of DRL methods for survival and gene essentiality prediction on bulk RNAseqdocker-dependency-updater
Checks system dependencies and update them if requiredLove Open Source and this site? Check out how you can help us