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wf-human-variation
wf-single-cell
wf-transcriptomes
tutorials
modbam2bed
wf-artic
ARTIC SARS-CoV-2 workflow and reportingwf-metagenomics
Metagenomic classification of long-read sequencing datapychopper
cDNA read preprocessingwf-basecalling
wf-pore-c
wf-clone-validation
kraken2-server
Kraken2 Serverwf-bacterial-genomes
Small variant calling for haploid samplesfastcat
Simple utility to concatenate .fastq(.gz) files whilst creating a summary of the sequences.ezcharts
wf-flu
wf-alignment
wf-template
Nextflow workflow template repositorylabslauncher
Management application for Epi2MeLabs notebook serverwf-isoforms
igv-jupyterlab
Integrate Genome Viewer for JupyterLab 3wf-amplicon
wf-human-snp
Small variant calling for human samplesaplanat
Simplifies bokeh plotting, particularly tailored for JupyterLabwf-16s
jupyterlab-autorun-cells
Allows toggling of code cells to execute automatically after opening a notebook.pore-c-py
wf-cnv
epi2me-labs.github.io
wf-somatic-variation
jupyterlab-play-cell-button
Jupyterlab extension attaching a play button to cellsjupyterlab-code-cell-collapser
A Google Colab inspired code cell collapserwf-cas9
wf-aav-qc
nanolabs
Nanolabs container stackwf-mpx
epi2melabs
Utility functions epi2melabs notebookspykraken2
wf-tb-amr
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