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FourierTools.jl
Tools for working with Fourier space.Scalable-Angular-Spectrum-Method-SAS
Implementations of the Scalable Angular Spectrum MethodTiledViews.jl
Allows an AbstractArray, to look like an AbstractArray with one more dimension and the tiles are represented along this dimension.Beamerscope_MATLAB
This is a repository for a 3D printed DIY microscope with a structured illumination using a LED video-projector and an Android Cellphone. This is the MATLAB Code to create a machine learning dataset from phasecontrast images and its corresponding optimized illumination sources.Image-Processing-In-Microscopy-2021-2022
Course material for "Image Processing in Microscopy" at the Friedrich Schiller University in Jena in the winter term 2021/22IndexFunArrays.jl
Fun with indices (and functions on them)Image-Processing-In-Microscopy-2022-2023
Introduction_Image_Processing_Julia
Material for 6th NORMIC Image Processing WorkshopcellSTORM-Tensorflow
Image-to-Image network to localize dSTORM events in Tensorflow. Publication link: https://arxiv.org/abs/1804.06244View5D
An image viewer for up to 5-dim data www.nanoimaging.de/View5Dbionanoimaging.github.io
Repository for hosting the website filesNDTools.jl
A lightweight package for utility functions for working with multi-dimensional datacellSTORM-ANDROID
Application to readout BW-frames from HUAWEI derived from Camera2RAW and FreedCAMPSFToolbox-Matlab
Includes various ways to calculate point spread functions (PSFs) with a focus on high NA fluorescence microscopy.Beamerscope-ANDROID
Beamerscope-ANDROIDcellSTORM-pyTorch
Code to train the image enhancement for the cellSTORM approachTensorflow_MultipleScattering
Repo to compare different single/multiple scattering algorithms computationally.matlab_tools
cellSTORM_TENSORFLOW
This is the APP to localize dSTORM experiments using an Android cellphone and an image-to-image GANcellSTORM-MATLAB
Code to generate datasets for the cellSTORM approachPSFDistiller.jl
Distills a point spread function (PSF) from a measurement of beads by selecting local maxima that are separate enough from other ones.cameracalibration
This is a Napari Plugin that calibrates your camera w.r.t. readnoise and gainBeamerscope_TENSORFLOW
This creates a Tensorflow Graph for the automaized illumination detection.Beamerscope_CAD
Learn to illuminate with an optimized light-source shape. This is the CAD Repository for the projector based cellphone microscope which is benefitting from the light source.NanoImagingPack
Python pack for nanoimaging-related tasksLove Open Source and this site? Check out how you can help us