• Stars
    star
    28
  • Rank 877,384 (Top 18 %)
  • Language
    Rust
  • License
    MIT License
  • Created almost 4 years ago
  • Updated 7 months ago

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

A (very) fast program for getting statistics about a fastq file, the way I need them, written in Rust

More Repositories

1

nxf-kraken2

A simple nextflow pipeline for running kraken2 and bracken in a docker container
Nextflow
18
star
2

nxf-fastqc

A simple fastp-MultiQC nextflow pipeline
Nextflow
10
star
3

readGC

parser for Shimadzu GCsolution data
R
6
star
4

nextflow-fastp-shiny

a shiny frontend for the nextflow-fastp pipeline
R
5
star
5

tidydrc

tidy modelling of dose-response relationships with the drc package
R
4
star
6

nxf-bcl

A simple nextflow pipeline for Illumina run metrics (InterOp) and generation of fastq files (bcl2fastq)
Nextflow
4
star
7

ngs-reports

Advanced Rmarkdown templates for generating NGS reports
R
3
star
8

wink

What's In my Nanopore reads, with Kraken2, in real-time
R
3
star
9

nxf-dada2

A nextflow pipeline for the analysis of 16S amplicon data built around RExMap
R
2
star
10

fastjac

k-mer similarity metrics for two fastx files
Rust
2
star
11

samplesheet-generator

A sample sheet generator for Illumina sequencing
CSS
2
star
12

nanotimes

work with the time stamps of Oxford Nanopore (ONT) fastq files
Rust
2
star
13

TRACEview

Shiny app for visualising HPLC traces
R
1
star
14

nfcore-mag-shiny

R
1
star
15

facsR

quickly plot FACS data
R
1
star
16

nfcore-bacass-shiny

R
1
star
17

worldclock

shiny app showing the time in different time zones
R
1
star
18

nxf-ont

A nextflow pipeline for processing raw Nanopore data
Nextflow
1
star
19

nextflow-bcl-shiny

a shiny frontend for the nextflow-bcl pipeline
R
1
star
20

google-location-heatmap

upload your google location history data and visualize it as a heatmap
R
1
star
21

fastkmers

Obtain k-mer counts from fastx files
Rust
1
star
22

openflights

A leaflet map with the openflights.org data
R
1
star