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DnaFeaturesViewer
๐๏ธ Python library to plot DNA sequence features (e.g. from Genbank files)pdf_reports
๐ Python library and CSS theme to generate PDF reports from HTML/PugDnaChisel
โ๏ธ A versatile DNA sequence optimizerFlametree
๐ฅ Python file and zip operations made easyTaskpacker
๐ Simple schedule optimization library for Pythonblabel
๐ท๏ธ Python label/sticker PDF generation. HTML templates, built-in barcodes, qr codes, and other goodiesProglog
๐ Logs and progress bars manager for Pythonlala
๐ Analyze and generate reports of web logs (NGINX)DnaCauldron
โ๏ธ Simple cloning simulator (Golden Gate etc.) for single and combinatorial assembliesPlateo
๐ค Python biolab automation library: parsers, reports generators, picklists simulators, and morePrimavera
๐ธ Python library for primer-based verification of DNA assemblies: primer selection, data analyis, etc.codon-usage-tables
๐ Codon usage tables in code-friendly format + Python bindingsGeneblocks
๐ Find common blocks and differences between DNA sequencescrazydoc
Read DNA sequences from colourful Microsoft Word documentsDnaWeaver
A route planner for DNA assemblyCaravagene
๐จ Python library to plot multi-part genetic constructsgenome_collector
๐ Easily download genomes and build BLAST/Bowtie indexes in PythonCAB
๐ The friendly Computational App Boilerplate. Django + Vue.JS + Redis queues + NginXCUBA
๐๏ธ The EGF Collection of Useful Bio Apps - Web demos of EGF softwareBandWagon
๐บ Plot DNA digestion band patterns with PythonBandWitch
๐ซ Computer-aided DNA assembly validation and identification from restriction digests.SBOL-Visual-CSS
โฐ Draw genetic elements with HTML & CSSgenedom
Batch domestication of genetic parts with PythonSequeduct
Sequencing analysis pipelinebioprinter
๐จ๏ธ Print pictures with living micro-organisms !Minotaor
An amino acid sequence annotatortatapov
๐พ DNA overhang misannealing data for PythonGoldenHinges
๐ Short overhangs design for DNA assemblyzymp
โ๏ธ Design compact restriction sites arrays (python utility)kappagate
๐ฎ Predict DNA assembly clone validity rates - powered by Kappadab
๐ EGF Design and Build, the Foundry's DNA design ordering portalegf-shared-documents
๐ Shared slideshows, courses, etc. from the EGFeasy_dna
๐ Python library to read, write, edit DNA sequencesicebreaker
โ๏ธ Python API for the JBEI-ICE sample managerExamples
Collection of Python modules and Jupyter notebook examplestopkappy
๐ Pythonic bindings for the Kappa model simulation languagecrecombio
A simple Cre, Flp and other site-specific recombination simulatorHowTo
๐ Short opinionated recipes, mostly for us.genedeals
Data on different commercial offers for gene-sized DNAigem-registry-downloader
Download the full iGEM database of partssaboteurs
๐ฃ Identify elements impairing success accross group experiments.Ediacara
Python package for interpreting sequencing data of assembled DNA constructs (plasmids)DnaWeaver-online
A web app for DNA Weavertrellab
Thin layer on top of pytrello for automating Trello organization-based tasksPolymera
Polymera is a Python package for representing ambiguous sequences written with complement alphabets.OT2Metclo
MSc projectGeneAlloy
Edinburgh-Genome-Foundry.github.io
๐ The EGF Software Websitetatapov_data
Data for the EGF Tatapov packageegf-codons-website
๐ Sources of the EGF Codons website, written with Vue.jsOverhang
Compendium of overhangsPlasmid_assessor
Plasmid assessment for Golden Gate cloningImagesAnnotator
Simple web app to annotate images by hand - built with Vue.jsEGF_Docker_Jupyter
Docker Jupyter images with (almost) all EGF packagesLove Open Source and this site? Check out how you can help us