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snakemake-mothur
Example of a snakemake workflow implementation of the mothur MiSEQ SOPdina-local-deployment
Deployment scripts and files for local deployment of the DINA systemGalaxy
Galaxy tool wrappers, tool dependencies, and workflows.dina-ui
React based user interface for the DINA project / Interface utilisateur basée sur React pour le projet DINAsnakemake-amplicon-metagenomics
Command line bioinformatics workflows, created with Snakemake workflow management tool.AODP_releases
Releases of Automated Oligo Design Pipeline (AODP): [email protected]snakemake-partial-genome-pipeline
Snakemake Pipeline for processing BioMob WP2 partial genome sequencing datamatiri
Concurrent mysql backup script with metadata in Sqlite3;dina-planning
AAFC-DINA planning repositorydina-base-api
Base DINA API package for Java built on SpringBootMBB-Bio-Roll
Extended bioinformatics roll for the Rocks clusterseqdb-api
Services for managing laboratory workflows and DNA sequence tracking / Services permettant la gestion de donnée de laboratoire et le suivi de séquences d’ADN.natural-history-collection-api
AAFC DINA Collection module implementation / Implémentation du module de Collection DINA de AACsnakemake-trimmomatic
Example of a snakemake encapsulation of trimmomaticsnakemake-barcoding-assembly-pipeline
Snakemake Pipeline for processing COI sequencing dataxlsx2redmine
Import a task list in XLSX format into redminepuppet-manifests
Repository housing puppet manifests developped by MBB at AAFCMBB-Bio-Roll-Docker
Docker files for bioinformatics & related toolsdockerfiles
Repository housing Dockerfiles created by MBB at AAFCdina-db-init-container
init-container used to manage DINA databases for dev/test envrpmout
List RPMs on a system & generate JSON, HTML, LaTeX, and CSVbiomob-portal-planning
Repository where users and developers can create and discuss issues during developmentdina-search-api
Search module for AAFC-DINAauchenorrhyncha-ortholog-baitset
A repository supporting the methodology and distribution of a custom baitset used for insect target enrichment sequencingback-lite
Lightweight backup automation, logging, and organisation system with support for multiple targetsstaphylinidae-ortholog-baitset
Code used to generate Staphylinidae baits for use in BioMob WP2 experiments, along with the bait set itselfreference-data-manager
Manages reference data for bioinformatics analysis.elateridae-ortholog-baitset
Code used to generate Elateridae baits for use in BioMob WP2 experiments, along with the bait set itselfLove Open Source and this site? Check out how you can help us