Refinery Platform (@refinery-platform)
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refinery-platform

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  • Stars
    star
    157
  • Global Org. Rank 45,957 (Top 15 %)
  • Registered almost 9 years ago
  • Most used languages
    Python
         42.9 %
    JavaScript
         21.4 %
    CSS
         7.1 %
    R
         7.1 %
    Puppet
         7.1 %
    Web Ontology Language     7.1 %
    Java
         7.1 %
  • Location 🇺🇸 United States
  • Country Total Rank 33,109
  • Country Ranking
    Web Ontology Language     34
    Puppet
         426
    R
         4,273
    Python
         6,870

Top repositories

1

refinery-platform

The Refinery Platform is a data management, analysis and visualization system for bioinformatics and computational biology applications. The platforms consists of three major components: a data repository with rich metadata capabilities, a workflow engine based on the popular Galaxy system, and visualization tools to support the exploration and interpretation of results at all stages of the analysis process.
Python
102
star
2

heatmap-scatter-dash

Interactive visualizations for differential expression
Python
25
star
3

django_docker_engine

Django app that manages the creation of, and proxies requests to, Docker containers.
Python
6
star
4

galaxy-tools

R
4
star
5

refinery-utility-visualization

JavaScript
3
star
6

sample-data

Sample data sets and generators for Refinery.
Python
3
star
7

get-reference-genomes

Get reference genomes from UCSC and prepare them for use by IGV.js
Python
3
star
8

ontology-imports

Ontology batch import definition files
Web Ontology Language
2
star
9

neo4j-ontology

Plugins and extensions for Neo4J to handle ontologies
Java
2
star
10

satori

SATORI - A System for Ontology-Guided Visual Exploration of Biomedical Data Repositories
CSS
2
star
11

visualization-tools

Registry for Visualization Tool Annotations that are compatible with Refinery (https://github.com/refinery-platform/refinery-platform)
Python
2
star
12

provvis

Refinery's Provenance Visualization
JavaScript
1
star
13

heatmap-volcano-pca

JavaScript
1
star
14

refinery-deployment

Puppet
1
star