Roche/Genentech - Insights Engineering (@insightsengineering)
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insightsengineering

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Top repositories

1

rtables

Reporting tables with R
R
224
star
2

teal

Exploratory Web Apps for Analyzing Clinical Trial Data
R
173
star
3

tern

Table, Listings, and Graphs (TLG) library for common outputs used in clinical trials
R
76
star
4

thevalidatoR

Github Action that generates R Package Validation documentation 🏁
R
57
star
5

teal.modules.clinical

Provides teal modules for the standard clinical trials outputs
R
32
star
6

random.cdisc.data

Create random CDISC data
R
30
star
7

teal.gallery

A Gallery of Exploratory Web Apps used for Analyzing Clinical Trial Data
R
29
star
8

rlistings

Value formatting and ASCII rendering infrastructure for tables and listings.
R
24
star
9

r.pkg.template

An opinionated R package template with CI/CD built-in
Shell
21
star
10

tlg-catalog

A catalog of Tables, Listings and Graphs (TLGs) created with NEST R packages
JavaScript
19
star
11

rbmi

Reference based multiple imputation R package
R
15
star
12

formatters

A framework for creating listings of raw data that include specialized formatting, headers, footers, referential footnotes, and pagination.
R
15
star
13

sasr

sasr
R
14
star
14

cards

CDISC Analysis Results Data
R
12
star
15

scda

Access Synthetic CDISC Data from Archive Packages
R
12
star
16

JointSurvivalModels.jl

Julia implementation of joint models combining longitudinal and survival endpoints
Julia
12
star
17

cardx

R Package to Supplement ARD Functions Found in {cards}
R
12
star
18

teal.code

Code storage and execution class for teal applications
R
11
star
19

teal.slice

Reproducible slice module for teal applications
R
11
star
20

hermes

Preprocessing, analyzing, and reporting of RNA-seq data
R
10
star
21

ci-images

Insights Engineering Container Images
R
10
star
22

simIDM

Simulation Engine for Multistate Models
R
10
star
23

teal.modules.general

General Purpose Teal Modules
R
9
star
24

scda.2022

An archive of synthetic CDISC data for 2022
R
9
star
25

teal.reporter

Create and preview reports with Shiny modules
R
8
star
26

tern.gee

Create TLGs using Generalized Estimating Equations (GEE)
R
8
star
27

hex-stickers

hex sticker archive
R
8
star
28

teal.data

Data model for teal applications
R
8
star
29

teal.modules.hermes

RNA-seq analysis modules to add to a teal application
R
7
star
30

coverage-action

Github Action that generates a coverage summary using a Cobertura XML report
6
star
31

tern.mmrm

Create MMRM TLGs using lme4 and tern
R
6
star
32

ggplot2.utils

Utilities, in particular geoms and stats, for use with ggplot2
R
6
star
33

biomarker-catalog

Biomarker Analysis Templates of Tables And Graphs 📊
SCSS
5
star
34

teal.osprey

Community efforts to collect teal modules for TLGs defined in the osprey package
R
5
star
35

nestcolor

Package managing visual conventions of NEST graphs
R
5
star
36

goshawk

Functions that plot and summarize biomarkers/labs of interest
R
5
star
37

r-spellcheck-action

Github Action that performs a spell check on an R package
R
4
star
38

teal.logger

Logging setup for the teal family of packages
R
4
star
39

uniCATE

Univariate conditional average treatment effect estimation for predictive biomarker discovery
R
4
star
40

teal.widgets

shiny widgets for teal applications
R
4
star
41

presidio-cli

CLI tool that analyze Text for PII Entities with Microsoft Presidio framework.
Python
4
star
42

osprey

Community effort to collect TLG code and create a catalogue
R
4
star
43

depository

A depository for previously released R packages stemming from this organization.
HTML
3
star
44

staged-dependencies-action

Github Action to implement R development stages for package development
R
3
star
45

scda.2021

An archive of synthetic CDISC data for 2021
R
3
star
46

bioc-check-action

Github Action that runs Bioconductor-specific R package checks with BiocCheck.
R
3
star
47

teal.goshawk

Modules that produce web interfaces through which longitudinal visualizations can be dynamically
R
3
star
48

tern.rbmi

Create TLGs using rbmi and tern
R
3
star
49

unihtee

Tools for uncovering treatment effect modifiers in high-dimensional data.
R
3
star
50

teal.transform

Reproducible transform and merge module for teal applications
R
3
star
51

r-verdepcheck-action

Github Action to check if R package works correctly with minimum version of dependencies installed
R
3
star
52

bsafe

TBD
R
2
star
53

r-license-report

Github Action to generate an R Package Dependencies' License Report
R
2
star
54

nesttemplate

pkgdown template for NEST packages
JavaScript
2
star
55

scda.test

Package that runs tests for tern and scda
R
2
star
56

presidio-action

Github Action that analyze Text for PII Entities with Microsoft Presidio framework.
2
star
57

framework-scientific-apps

AMIA 2021 - Case study in the development of a framework for quality and reproducibility in inner-sourced packages and self-service analytic dashboards
TeX
2
star
58

codecollaboration

HTML
1
star
59

bonsaiforest

R
1
star
60

nest-2023-summeR

JavaScript
1
star
61

verdepcheck

An R package that tests your R package against the min/max versions of specified dependencies
R
1
star
62

teal.modules.bsafe

Teal modules for bsafe
R
1
star
63

covtracer-action

Github Action based on the Covtracer R package
R
1
star
64

r-pkgdown-multiversion

Github Action to generate multiple versions of pkgdown docs for R packages
R
1
star