WHOI GitHub Central (@WHOIGit)
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Top repositories

1

FishDetector

🐟🔍 Detect fish in images and video
Python
21
star
2

ros-web-gamepad

HTML
9
star
3

ifcbdb

IFCB dashboard
Python
8
star
4

whoi-hab-hub

Harmful Algal Bloom data API and map project
Python
6
star
5

nes-lter-ims

NES-LTER information system components
Python
5
star
6

ooicgsn-roundabout

CGSN Roundabout Asset Tracking system
Python
4
star
7

scipy-talk

Jupyter Notebook
4
star
8

ndsf-sealog-client

NDSF edition of the Sealog event logging web client
JavaScript
4
star
9

ros-chess-challenge

Python
3
star
10

ifcb_classifier

Image classifier for the IFCB plankton dataset
Python
3
star
11

whoi-git-workshop

Git and GitHub workshop @ WHOI, June 2020
2
star
12

nes-lter-notebooks

Jupyter notebooks related to NES-LTER
Jupyter Notebook
2
star
13

ndsf-sealog-scripts

Scripts used for the NDSF Sealog deployments
Python
2
star
14

nes-lter-fish-diet-isotope

Northeast U.S. Shelf fish diet and stable isotope data packages prepared for EDI
2
star
15

photic

Image annotation tool
JavaScript
2
star
16

cesm-tritium-helium3

Tritium-helium3 module for CESM
Fortran
2
star
17

1dpop-aux

Auxiliary code for CESM 1DPOP configuration.
Fortran
2
star
18

alvin-observer-ui-client

React frontend client for Alvin observer camera controls
HTML
2
star
19

nelme-bottom-water-bgc

Jupyter Notebook
2
star
20

metatryp-2.0

Python
2
star
21

ISIIS-analysis

Stingray-ISIIS image analysis, metadata, and ocean data analysis (NES-LTER and OTZ)
MATLAB
2
star
22

django-nginx-postgres-docker

A Docker Compose starter kit with Nginx, Django, Gunicorn, and Postgres database.
Python
2
star
23

SPIROPA-project

SPIROPA (Shelfbreak Productivity Interdisciplinary Research Operation at the Pioneer Array) Project team repository
MATLAB
2
star
24

domdb

DOM mass spec database prototype
Python
1
star
25

bic

Benthic illumination correction
C++
1
star
26

appdev-analytics-backend

Research website traffic analyzer - backend API
Python
1
star
27

whoi-plankton

WHOI plankton identification website
HTML
1
star
28

nes-lter-ifcb-transect-winter-2018

NES-LTER Transect Cruise EN608 Winter 2018 Imaging FlowCytobot (IFCB) manual annotation data package being prepared for EDI
R
1
star
29

ndsf-sealog-server

NDSF edition of the Sealog event logging server
JavaScript
1
star
30

nes-lter-fish-diet

Northeast US shelf fish diet packages prepared for EDI
1
star
31

minimal-edi-package

Minimal EML assembly line example
1
star
32

django-cookiecutter-starterkit

A basic Starterkit for a Django project based on the Cookie Cutter project template. Uses Docker, Nginx, Postgres, and Redis
Python
1
star
33

nes-lter-examples

Example data and code for using NES-LTER data
Jupyter Notebook
1
star
34

cesm-tritium-helium3-init

Jupyter Notebook
1
star
35

1dpop-cesm2-aux

Auxiliary code for CESM2 1DPOP configuration
Fortran
1
star
36

nes-lter-chl-transect-underway-discrete

NES-LTER Transect cruise chlorophyll from underway discrete data package being prepared for EDI
1
star
37

avast-skills-matcher-db

Web app for AVAST to allow users to find other people at WHOI who have skills they require
TypeScript
1
star
38

Rshinypresentation

lunch and learn
HTML
1
star
39

ooicgsn-wind-validation

Validating METBK 2-sonic wind observations
Jupyter Notebook
1
star
40

1DVAR-carbonate

Fortran
1
star
41

daskification

demo for sceduling only part of Dask-distributed
Python
1
star
42

IFCB-CNN

Code repository for classification of plankton images from the MVCO IFCB using transfer learning on convolultional neural networks
Python
1
star
43

jupyter-talk

Jupyter notebook Lunch and Learn, 24 October 2018
Jupyter Notebook
1
star
44

2021-10-26-Workshop-API-INTRO

Intro to APIs, a lesson for WHOI virtual zoom workshop. Lesson using Carpentries Workshop template.
HTML
1
star