Discover @compneuro Open Source projects

Shyam Diwakar (@compneuro)

compneuro

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JavaScript
40.0 %

MATLAB
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Prolog
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AMPL 20.0 %
Location 🇮🇳 India
Country Total Rank 31,634
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Prolog
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LFPsim

Simulation scripts to compute Local Field Potentials (LFP) of cable compartmental models implemented with NEURON

DLCISNN

Cerebellum-inspired spiking neural network(DLCISNN), a hybrid of Spiking Neural Network and Deep learning networks with the architecture and firing behaviour inspired from cerebellar microcircuitry.

Amrita-Neuron-Simulator

A graphical web-based Neuron simulator (implemented on JS) and models neuronal spiking dynamics replicated in the soma or in a section of excitable neuronal membrane using the Hodgkin-Huxley equations. Developed as a virtual lab, several experiments on vlab.amrita.edu will be based on this educational tool. This JS based implementation allows simulating HH-style dynamics, AdEx integrate and fire neuron models.

TCOB_Neuron

TCOB is a constrained-object programming language, a temporal extension of the constrained-object language COB. This document contains instructions to create and run TCOB programs in Swi-prolog environment. In this implementation, we show how modeling neural and microcircuit network dynamics can be achieved using TCOB. Developed by Manjusha Nair, Jinesh Manchan Kannimoola, Shyam Diwakar Amrita Vishwa Vidyapeetham (University), Kollam, Kerala, India. and by Bharat Jayaraman State University at Buffalo, NY, USA. Last updated 26-February-2018 More details will be made available. This is a preliminary version of the code for results in the paper titled "A Temporal Constrained Object based Declarative Programming Paradigm for Modelling Neuronal Dynamics" (manuscript submitted).

ABioNLP

ABioNLP tool - A Biological Natural Language Processing Tool for Systems Biology, Translational science and Medicine. This tool is part of the paper "Mining Scientific Articles for Inter-Relationships and Visualisation: Natural Language Processing for Systems Biology Modeling" by Nidheesh Melethadathil, Priya Chellaiah, Jaap Heringa, Bipin Nair and Shyam Diwakar.