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souporcell
Clustering scRNAseq by genotypeslong_read_binner
tool to bin long noisy DNA reads by kmer setsphasstools
phasing and assembly toolsdistinguishing_kmers
Memory efficient (approximate) thresholded kmer set subtraction using mod hash minimizer.haplovalidate
method for validating genome assemblies using heterozygous kmers detected from short read datahet_snp_kmers2
het_snp_kmers
het snp detection from sorted kmc kmer database dumppedigree_data_simulator
Python scripts for simulating pedigree haplotypes and short and long reads from those haplotypes.phasst_lib
library for shared code in phasing and assembly tools projectsdna_io
automatic reading of fastq, fastq.gz, fasta, and possibly sam and bam (and cram?) and writing to your choice of formatLove Open Source and this site? Check out how you can help us