Haynes Heaton (@wheaton5)
github

wheaton5

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  • Stars
    star
    179
  • Global Rank 133,592 (Top 5 %)
  • Followers 49
  • Following 15
  • Registered about 11 years ago
  • Most used languages
    Rust
         63.6 %
    Python
         27.3 %
    TeX
         9.1 %
  • Location 🇺🇸 United States
  • Country Total Rank 31,558
  • Country Ranking
    Rust
         2,489
    TeX
         4,470
    Python
         6,282

Top repositories

1

souporcell

Clustering scRNAseq by genotypes
Python
153
star
2

long_read_binner

tool to bin long noisy DNA reads by kmer sets
Rust
7
star
3

phasstools

phasing and assembly tools
Python
6
star
4

distinguishing_kmers

Memory efficient (approximate) thresholded kmer set subtraction using mod hash minimizer.
Rust
5
star
5

haplovalidate

method for validating genome assemblies using heterozygous kmers detected from short read data
Rust
3
star
6

het_snp_kmers2

Rust
2
star
7

het_snp_kmers

het snp detection from sorted kmc kmer database dump
Rust
2
star
8

pedigree_data_simulator

Python scripts for simulating pedigree haplotypes and short and long reads from those haplotypes.
Python
2
star
9

phasst_lib

library for shared code in phasing and assembly tools projects
Rust
1
star
10

dna_io

automatic reading of fastq, fastq.gz, fasta, and possibly sam and bam (and cram?) and writing to your choice of format
Rust
1
star
11

intro_algorithms

course material for introduction to algorithms course at auburn university I am teaching
TeX
1
star