Discover pseudogene/lice-mitochondria Open Source project

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Perl
Created about 8 years ago
Updated over 7 years ago

pseudogene

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Scripts and tools used to analyse mitochondrial sequence variations between to strain of sea-lice (Lepeophtheirus salmonis)

lava-dna

LAVA (LAMP Assay Versatile Analysis) is an extendable open-source Loop-mediated isothermal AMPlification (LAMP)

Perl

genetic-mapper

SVG Genetic Map Drawer

Perl

lamp-virus

Pipeline to develop one-step real-time RT-LAMP assays for specific detection of virus

Perl

radmap

Analyse RAD-tags and generate the Genetic Map with GWAS

Perl

ora

Olfactory Receptor family Assigner (bioperl module)

Perl

docker-stacks

Stacks is a software pipeline for building loci from short-read sequences - Now in a Docker

Shell

lamp-denv

Scripts and tools used to develop one-step real-time RT-LAMP assays for specific detection of dengue virus.

Perl

contiguator

A bacterial genomes finishing tool for structural insights on draft genomes - Now in a Docker

mkssl

Shell script to Create a Certificate Authority and Certificates with OpenSSL

Shell

gridref

Convert Irish/British Grid Reference points to WGS84

PHP

busco-docker

Busco in a Docker

Dockerfile

fish_pedigree

Pedigree Chromosome Drawer

Python

virus_genomes

Collect Virus genomes from "NCBI assembly" database (internal)

Perl

rad-scripts

Various RAD-seq related scripts

Perl

uniprime

A workflow-based platform for improved Universal Primer design

PHP

vibrio-tnseq

Tn-seq pipeline for Vibrio sp.

Perl

ratt

RATT: Rapid Annotation Transfer Tool (Wellcome Trust Sanger Institute)

Perl

irishgrid

Irish Grid Mapping System

Perl

pseudogene/lice-mitochondria

pseudogene

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