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cobrapy
COBRApy is a package for constraint-based modeling of metabolic networks.cobratoolbox
The COnstraint-Based Reconstruction and Analysis Toolbox. Documentation:optlang
optlang - sympy based mathematical programming languagememote
memote – the genome-scale metabolic model test suiteCOBRA.jl
High-level, high-performance, constraint-based reconstruction and analysis in JuliaMATLAB.devTools
MATLAB Development ToolsMedusa
Analysis of ensembles of metabolic network reconstructionsm_model_collection
A collection of M models downloaded from published studiesdriven
Data-Driven Constraint-based analysisMASS-Toolbox
Mass Action Stoichiometric Simulation (MASS) ToolboxCOBRA.papers
Repository for scripts related to reproducing the results of an individual publicationcobra-component-models
Provide SQLAlchemy ORM and pydantic data models for SQL storage and serialization of COBRA components such as reactions, compounds, and compartments.memote-docker
Easily use the memote command line interface from a docker container.cookiecutter-memote
A cookiecuttter template for memote model repositoriescookiecutter-python-package
Extensive cookiecutter template for openCOBRA Python packages.schema
xml/rdf schemas for annotating cobra modelscobrapy_shim
Shim for the COBRA toolbox to call cobrapy functionscobrapy-bigg-client
cobrapy-website
ctf
Chemical table files for constraint-based modellingCOBRA.binary
Linux, Windows and Mac binaries maintained by the constraint-based reconstruction and analysis communityLove Open Source and this site? Check out how you can help us