There are no reviews yet. Be the first to send feedback to the community and the maintainers!
r-index
An optimal space run-length Burrows-Wheeler transform full-text indexBWTIL
BWT Text Indexing Library: a set of tools to work with BWT-based text indexesCTLSAT
CTL (Computation Tree Logic) SAT solverRe-Pair
A space-efficient compressor based on the Re-Pair grammarlz-rlbwt
Run-length compressed BWT with LZ77 sampled suffix arrayprogetto_PEL_22_23
Progetto Programmazione e Laboratorio 2022-2023cw-dBg
Compressed weighted de Bruijn graphebwt2InDel
ebwt2InDel: find SNPs and InDels from the BWT of a fasta read setbwt2lcp
Compute the LCP array from the BWT of a set of DNA strings.ebwt2snp
Positional clustering of the extended Burrows-Wheeler transformhigh-order-lz77
LZ77 with High-order compressed pointerscvs-rk
Critical Variables Selection via Rabin-Karp hashingrlbwt2lcp
Compute minimum LCP value for each BWT equal-letter runresource_monitor
Monitor memory usage (start and max RSS) and running time of a Linux processslz-rlbwt
Super light index for repetitive text collections combining a sparse RLBWT with a sparse LZ77 parseFMI
A simple wrapper on SDSL's FM-indexrk-lce
RK-LCE: a in-place LCE data structure based on Mersenne prime numbersbioinfo-tools
bash scripts to process fasta/vcf/.. filestest-bs-aligner
shell scripts to generate a BS experiment dataset and test on it a BS aligner + methylation callerLove Open Source and this site? Check out how you can help us