dariober/cnv_facets dariober/cnv_facets

  • Stars
    star
    62
  • Rank 488,199 (Top 10 %)
  • Language
    R
  • License
    Other
  • Created almost 6 years ago
  • Updated over 4 years ago
Twitter logo Share LinkedIn logo Share Facebook logo Share
dariober/cnv_facets
github

dariober

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

Somatic copy variant caller (CNV) for next generation sequencing

More Repositories

1

ASCIIGenome

Text Only Genome Viewer!
Java
203
star
2

bioinformatics-cafe

Unsorted scripts for bioinformatics
Python
52
star
3

SICERpy

Python wrapper around the popular ChIP-Seq peak caller SICER
Python
15
star
4

sympy-books

Maths textbook exercises implemented in SymPy
TeX
5
star
5

fxstat

Fast and easy stats for FASTA and FASTQ files
C
4
star
6

genomeGraphs

Command line program to visualize genomic data
Python
4
star
7

Java-cafe

A variety of bioinformatics programs written in Java
Java
3
star
8

Illumina-450K-oxBS

Code accompanying the manuscript "Accurate measurement of 5-methylcytosine and 5-hydroxymethylcytosine in human cerebellum DNA by oxidative bisulfite on an array (OxBS-array)"
TeX
3
star
9

SequenceMatcher

Match query sequences against reference sequences
Java
2
star
10

quadratic-programming-deconvolution

A tutorial on quadratic programming for deconvolution of mixed cell populations using R
TeX
2
star
11

test-setup-travis

Sandbox to experiment set up scripts with Travis CI
Shell
1
star
12

rebuilt-enhanced-methyl-seq

Code supporting the article "Enhanced Methylation Analysis by Recovery of Unsequenceable Fragments", McInroy et al., 2016
1
star
13

reference-code

Code used in published material like articles or theses.
1
star