• Stars
    star
    203
  • Rank 192,890 (Top 4 %)
  • Language
    Java
  • License
    MIT License
  • Created over 8 years ago
  • Updated 4 months ago

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

Text Only Genome Viewer!

codecov test status Language License install with bioconda

Text Only Genome Viewer!

Description

ASCIIGenome is a genome browser based on command line interface and designed for running from console terminals.

Since ASCIIGenome does not require a graphical interface it is particularly useful for quickly visualizing genomic data on remote servers while offering flexibility similar to popular GUI viewers like IGV.

Documentation is at readthedocs/asciigenome.

Support: Bugs, comments and issues can be reported here on GitHub or on Biostars.org.

Some key features:

  • Command line input and interaction, no graphical interface, minimal installation and requirements.
  • Can load multiple files in various formats.
  • Can access remote files via URL or ftp address.
  • Easy navigation and searching for features and sequence motifs and filtering options
  • Support for BS-Seq alignment