Discover crs4/blast-python Open Source project by CRS4 (@crs4)

Python library to parse, create and handle HL7 v2 messages.

232

hl7apy

Pytorch implementation of the ECCV 2020 paper: AtlantaNet: Inferring the 3D Indoor Layout from a Single 360 Image beyond the Manhattan World Assumption

217

AtlantaNet

OMERO.web app to support an image viewer based on OpenSeadragon

most-voip

HTML

ome_seadragon

Python modules for managing OpenEHR projects

pyEHR

SliceNet

Virtuoso SPARQL HTTP Client for Node.js

virtuoso-sparql-client

Automatically exported from code.google.com/p/notredam

notredam

tool for generating openEHR compositions from other formats

flatehr

Deep3DLayout

openEHR-tool

most-streaming

hadoop-galaxy

Light Hadoop-Galaxy integration

Hadoop-based suite of tools for processing NGS data

seal

Java

Galaxy4Developers

Training Course on Galaxy for Bioinformatics tool developers

CSS

hadoop-docker

Docker images for Apache Hadoop

health-gateway

Health Gateway

Biobank: large scale biomedical computation on OMERO

omero.biobank

deep_framework

Pytorch implementation of the paper: Deep Panoramic Depth Prediction and Completion for Indoor Scenes

PanoDPC

life_monitor

Workflow Sustainability Service

openEHR archetypes for genomics domain

openehr-genomics

crs4-telemed

Java

Jeenk

Jeenk: scalable genomics tools, powered by Apache Flink

Scala

DigitalPathologyPlatform

CRS4 Digital Pathology Platform

A cache mechanism for tiles and thumbnails that can be used with both ome_seadragon and ome_seadragon_gateway

ome_seadragon_cache

Demo of novel deep synthesis and exploration of omnidirectional stereoscopic environments method.

DeepOmniStereoFromMonoIndoorPano

Docker setup for http://github.com/crs4/omero.biobank

omero.biobank-docker

A distributed wrapper for NCBI BLAST

ArrivederciZag

biodoop-blast

Scalable tools for computational biology

ge-k8s

k8s on GridEngine

biodoop-core

Code used for investigating the use of Random Forests for classifying selected heartbeats features

ACTIVE

HTML

rf-ecg-heartbeat-classification

container-galaxy-elixir-is-varcall

Generate a Workflow RO-Crate from a best-practice workflow repository

repo2rocrate

A secure gateway for ome_seadragon

ome_seadragon_gateway

deephealth-pipelines

Docker image for ome_seadragon_gw (no Nginx server)

ome_seadragon_gw-docker

A Python package to validate RO-Crates

docker-hadoop

Dockerized Hadoop

rocrate-validator

Docker tools for Moodle development

moodle.docker-tools

Multi-container Docker application for the CRS4 infrastructure to support NGS laboratory automation.

aroundBika

Dockerfile

hypergate

A library for the integration of local resources to the Internet of Things

A python layer to interact seamlessly with several cloud facilities

orchestrator

HTML

moodle.omero-repository

PHP

ome_seadragon-docker

Docker image for ome-seadraogn

prompt

PROcess Mining in PyThon

Build Hadoop native libraries

hadoop-nativelibs-docker

A tag based filter for the Moodle question bank

moodle.qbank-tag-filter

PHP

moodle.omero-filepicker

moodle.omero-qtypes

This repo contains the docker image for tiledb with Python API and support for hdfs

tiledb-docker

From OMOP CDR in a Postgresql DB to phenopackets V2

PyPhenoFromOmop

most-medicalrecords

Vector Integration Site Parallel Analysis

vispa

Practical course dedicated to the Python programming for Bioinformatics.

python_for_life_scientists