CRS4 (@crs4)

Top repositories

1

pydoop

A Python MapReduce and HDFS API for Hadoop
Python
232
star
2

hl7apy

Python library to parse, create and handle HL7 v2 messages.
Python
204
star
3

AtlantaNet

Pytorch implementation of the ECCV 2020 paper: AtlantaNet: Inferring the 3D Indoor Layout from a Single 360 Image beyond the Manhattan World Assumption
Python
74
star
4

most-voip

HTML
36
star
5

ome_seadragon

OMERO.web app to support an image viewer based on OpenSeadragon
Python
31
star
6

pyEHR

Python modules for managing OpenEHR projects
Python
27
star
7

virtuoso-sparql-client

Virtuoso SPARQL HTTP Client for Node.js
JavaScript
20
star
8

SliceNet

Python
19
star
9

notredam

Automatically exported from code.google.com/p/notredam
JavaScript
17
star
10

flatehr

tool for generating openEHR compositions from other formats
Python
12
star
11

Deep3DLayout

Python
10
star
12

most-streaming

Java
8
star
13

hadoop-galaxy

Light Hadoop-Galaxy integration
Python
8
star
14

seal

Hadoop-based suite of tools for processing NGS data
Java
7
star
15

Galaxy4Developers

Training Course on Galaxy for Bioinformatics tool developers
CSS
7
star
16

hadoop-docker

Docker images for Apache Hadoop
Shell
5
star
17

health-gateway

Health Gateway
Python
5
star
18

deep_framework

JavaScript
5
star
19

omero.biobank

Biobank: large scale biomedical computation on OMERO
Python
5
star
20

openEHR-tool

Tool for openEHR
HTML
4
star
21

life_monitor

Workflow Sustainability Service
Python
4
star
22

openehr-genomics

openEHR archetypes for genomics domain
4
star
23

crs4-telemed

Java
4
star
24

Jeenk

Jeenk: scalable genomics tools, powered by Apache Flink
Scala
3
star
25

DigitalPathologyPlatform

CRS4 Digital Pathology Platform
Python
3
star
26

ome_seadragon_cache

A cache mechanism for tiles and thumbnails that can be used with both ome_seadragon and ome_seadragon_gateway
Python
3
star
27

DeepOmniStereoFromMonoIndoorPano

Demo of novel deep synthesis and exploration of omnidirectional stereoscopic environments method.
Python
3
star
28

omero.biobank-docker

Docker setup for http://github.com/crs4/omero.biobank
Python
2
star
29

ArrivederciZag

2
star
30

biodoop-blast

A distributed wrapper for NCBI BLAST
Python
2
star
31

biodoop-core

Scalable tools for computational biology
Python
2
star
32

ge-k8s

k8s on GridEngine
2
star
33

ACTIVE

HTML
2
star
34

rf-ecg-heartbeat-classification

Code used for investigating the use of Random Forests for classifying selected heartbeats features
Python
2
star
35

python_for_life_scientists

Practical course dedicated to the Python programming for Bioinformatics.
JavaScript
1
star
36

container-galaxy-elixir-is-varcall

Python
1
star
37

blast-python

Python bindings for NCBI BLAST
Python
1
star
38

repo2rocrate

Generate a Workflow RO-Crate from a best-practice workflow repository
Python
1
star
39

ome_seadragon_gateway

A secure gateway for ome_seadragon
Python
1
star
40

deephealth-pipelines

Python
1
star
41

ome_seadragon_gw-docker

Docker image for ome_seadragon_gw (no Nginx server)
Shell
1
star
42

docker-hadoop

Dockerized Hadoop
1
star
43

moodle.docker-tools

Docker tools for Moodle development
Shell
1
star
44

PanoDPC

Pytorch implementation of the paper: Deep Panoramic Depth Prediction and Completion for Indoor Scenes
1
star
45

orchestrator

A python layer to interact seamlessly with several cloud facilities
HTML
1
star
46

aroundBika

Multi-container Docker application for the CRS4 infrastructure to support NGS laboratory automation.
Dockerfile
1
star
47

hypergate

A library for the integration of local resources to the Internet of Things
JavaScript
1
star
48

moodle.omero-repository

PHP
1
star
49

ome_seadragon-docker

Docker image for ome-seadraogn
Shell
1
star
50

moodle.qbank-tag-filter

A tag based filter for the Moodle question bank
PHP
1
star
51

prompt

PROcess Mining in PyThon
Python
1
star
52

hadoop-nativelibs-docker

Build Hadoop native libraries
Shell
1
star
53

moodle.omero-filepicker

JavaScript
1
star
54

moodle.omero-qtypes

JavaScript
1
star
55

tiledb-docker

This repo contains the docker image for tiledb with Python API and support for hdfs
Python
1
star
56

PyPhenoFromOmop

From OMOP CDR in a Postgresql DB to phenopackets V2
Python
1
star
57

most-medicalrecords

Python
1
star
58

vispa

Vector Integration Site Parallel Analysis
Python
1
star