• Stars
    star
    2
  • Language
    Python
  • License
    MIT License
  • Created over 2 years ago
  • Updated almost 2 years ago

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

Specifications of output format for "Jeiss" FIBSEMs

More Repositories

1

zarr3-rs

Prototype implementation of zarr v3 in rust
Rust
18
star
2

molesq

Moving Least Squares algorithm for python
Python
11
star
3

eulerscraper

A script to scrape projecteuler.net's problems
Python
9
star
4

ncollpyde

Mesh containment and line segment intersection queries in Python (over rust)
Python
9
star
5

yarqueue

Yet Another Redis Queue for python; but API-compliant and modern
Python
8
star
6

f_it

Functional Iterator for python
Python
8
star
7

recursum

Rust script to quickly hash all files in a directory tree
Rust
6
star
8

plotstyles

A demsontration of the different default plotting styles available in matplotlib
Python
5
star
9

nblast-rs

Rust
4
star
10

bct

An unofficial github repository for the Brain Connectivity Toolbox
MATLAB
4
star
11

h5py_like

Base classes and convenience functions for wrapping simple array access functions in a h5py-like API
Python
4
star
12

backports.strenum

Base class for creating enumerated constants that are also subclasses of `str`
Python
4
star
13

CATMAID-synapsesuggestor

Python
3
star
14

nblast-py

Pure-python implementation of NBLAST, for experimentation purposes
Python
3
star
15

coordinates

Convenience class for doing maths with explicit coordinates
Python
2
star
16

asciidoc-named-char-refs

Ruby
2
star
17

catmaid-catnap

Painting tool using CATMAID data and napari
Python
2
star
18

jeiss-convert

Convert Jeiss .dat files to HDF5
Python
2
star
19

smalldataviewer

Command-line tool and python library for visualising small 3D datasets
Python
2
star
20

citepy

Automatically create citations for packages
Python
2
star
21

arbor

A python implementation of (some of) Arbor.js and related tools
Python
1
star
22

detchar

Command line tool for detecting file encodings
Rust
1
star
23

hiveplotter

A python library for creating hive plots from networkx graphs
Python
1
star
24

jfibsem_dat

Python
1
star
25

multiscale_read

Read xarray.DataArrays from multiscale datasets with various metadata standards
Python
1
star
26

mlsnd

Moving Least Squares deformations in N Dimensions
Rust
1
star
27

prob_dist

An ipython notebook showing some common probability density functions.
Jupyter Notebook
1
star
28

neuroml-ts

WIP
JavaScript
1
star
29

elegans_morphology

WIP
Python
1
star
30

extreqs

Parse python requirements.txt files into setuptools extras
Python
1
star
31

arbor-harness

Testing tool for arbor.js reimplementations
JavaScript
1
star
32

problog_tutorial

Prolog
1
star
33

split_neurons

Find axon-dendrite split points for lots of CATMAID skeleton
JavaScript
1
star
34

raoc

Script to automate random acts of coffee: random scheduled meetups within a group
Python
1
star
35

containers

Useful containers for cluster image processing
Python
1
star
36

gmusicplaylists

A script for automatically generating some popular playlists on Google Play Music All Access
Python
1
star
37

pyenv-mkenv

Simple script to help create and use pyenv virtualenvs
Python
1
star
38

toolup

Convenience package for installing python-based development tools
Python
1
star
39

imslice

Python library for slicing 3D arrays in arbitrary orientations
Python
1
star
40

inkscape-docker

Unofficial docker image for installation of specific inkscape releases for command-line use.
Dockerfile
1
star
41

neurarrow

Specification for neuroscience data in arrow/ parquet format
1
star