NEONScience/phenology-by-agdd

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NEONScience/phenology-by-agdd

NEONScience

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Files associated with shiny app for graphing phenology status intensity by agdd and temperature

NEON-Data-Skills

Self-paced tutorials that review key data literacy concepts and data analysis skills. Published materials can be found at:

NEON-utilities

Utilities and scripts for working with NEON data. Currently: an R package with functions to join (stack) the month-by-site files in downloaded NEON data, to convert data to geoCSV format, and to download data from the API.

neon-data-api

NEON Data API Documentation

NEON-geolocation

Code package for handling NEON geolocation data. Includes functions to extract spatial data from the API based on a named location, and to calculate more precise locations for select observational data products.

eddy4R

NEON-IS-data-processing

Next generation data processing algorithms and pipeline components for (most) NEON TIS and AIS data products.

DI-NEON-participants

A repository used for training and collaboration in NEON Data Institutes and other workshops.

NCAR-NEON

Repository for developing code related to NCAR-NEON workshop

Jupyter Notebook

WORKSHOP-GLEON-NEON-2022

This repository contains the code that will be used for the 2022 GLEON-NEON workshop

NEON-stream-discharge

Code and packages for NEON stream discharge calculations. Includes (1) the code package used to generate NEON's Stream discharge rating curve (DP4.00133.001) and Stream discharge (DP4.00130.001) data products and (2) a package for calculating point estimates of discharge from salt injections.

WORKSHOP-AEMON-J-DSOS-2022

This repository contains the code that will be used for the AEMON-J/DSOS workshop: An introduction to workflow management software in ecology (https://aquaticdatasciopensci.github.io/day2-bigdata/).

neonPlants

Library of R functions to work with NEON plant data

portal-core-components

Shared Javascript and React Components for the NEON Data Portal front-end

NEON-dissolved-gas

Repository for a code package that calculates dissolved gas concentrations from air and equilibrated water data, from NEON's Dissolved gases in surface water (DP1.20097.001) data product.

portal-react-apps

Neonscience.org pages/sections built as React SPAs and managed as Yarn Workspaces

SummitMicrobes

Developing and sharing code and analyses of soil microbial data

NEON-AOP-H5toENVI

ENVI Extension for reading AOP HDF5 formatted files.

WORKSHOP-AEMON-J-DSOS-2021

This repository is for attendees of the 2021 AEMON-J/DSOS Big (ecological) Data Day. https://aquaticdatasciopensci.github.io/day2-bigdata/

Cyverse-AOP-Workshop

This is a public repository to be used as a part of the NEON-Cyverse AOP workshop Nov 5-7, 2020

Jupyter Notebook

WORKSHOP-ICRW8-2023

This repository contains the code that will be used for the 2023 ICRW8 workshop

NEON-OS-data-processing

Algorithms for processing NEON observational data

esa2023-sc11-biodiversity

Repository for ESA 2023 Short Course 11 - Explore and Work with Continental-Scale Biodiversity Data: An Introduction to Analysis-Ready NEON and US LTER Data Using Cloud-Native Tools

neon-swift

A Shiny app for TIS data visualization

neon-plant-sampling

Scripts supporting NEON plant diversity, biomass and productivity sampling

public-code-development

Repository for project board tracking public code development in progress

eddy4R-documentation

This repository is for the review of eddy4R wiki materials.

slide-shows

This repo contains reveal.js slideshows used by the NEON Data Skills programs

NEON-Nitrogen-Transformations

Repository for a code package that calculates nitrogen transformation rates from soil nitrogen content measurements, from NEON's Soil inorganic nitrogen pools and transformations (DP1.10080.001) data product

NEON-reaeration

Repository for a code package that calculates reaeration rate from NEON's Reaeration field and lab collection (DP1.20190.001) data product

NEON-drift-correction

Development of drift correction algorithms and evaluation

neon-data-institute-2016

This repository hosts the educational materials for the NEON Data Institute on Remote Sensing with Reproducible Workflows (2016).

NEON-IS-avro-schemas

Avro schemas used for NEON IS data processing