Environmental Genomics Group SciLifeLab/KTH Stockholm (@EnvGen)
Guthub

EnvGen

Twitter logo Share LinkedIn logo Share Facebook logo Share
  • Stars
    star
    103
  • Global Org. Rank 57,180 (Top 19 %)
  • Registered almost 12 years ago
  • Most used languages
    Python
         71.4 %
    Perl
         28.6 %
  • Location πŸ‡ΈπŸ‡ͺ Sweden
  • Country Total Rank 1,917
  • Country Ranking
    Perl
         44
    Python
         594

Top repositories

1

snakemake-workflows

Common Snakemake rules and workflows mainly directed towards Metagenomic analysis.
Python
19
star
2

LabProtocols

The Environmental Genomic Group also does lab work. This is how we do it.
12
star
3

toolbox

Various scripts used at the EnvGen group, directed towards metagenomic analysis.
Python
10
star
4

POGENOM

Population genomics from metagenomes
Perl
10
star
5

BARM_tools

A set of tools that are useful to reuse the Baltic Sea Reference Metagenome
Python
2
star
6

BLUEPRINT_pipeline

The bioinformatics pipeline used in the BLUEPRINT project
Python
1
star
7

Tutorials

A few guides in how to use our tools, and some other people's tools as well.
Perl
1
star
8

mix_assembly_pipeline

Mix_assembly gene catalog pipeline
Python
1
star