EnvGen/Tutorials

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Created about 11 years ago
Updated over 5 years ago

EnvGen/Tutorials

EnvGen

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A few guides in how to use our tools, and some other people's tools as well.

snakemake-workflows

Common Snakemake rules and workflows mainly directed towards Metagenomic analysis.

LabProtocols

The Environmental Genomic Group also does lab work. This is how we do it.

toolbox

Various scripts used at the EnvGen group, directed towards metagenomic analysis.

POGENOM

Population genomics from metagenomes

BARM_tools

A set of tools that are useful to reuse the Baltic Sea Reference Metagenome

BLUEPRINT_pipeline

The bioinformatics pipeline used in the BLUEPRINT project

mix_assembly_pipeline

Mix_assembly gene catalog pipeline