Discover @mathieuboudreau Open Source projects

Mathieu Boudreau, PhD (@mathieuboudreau)

mathieuboudreau

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Registered almost 13 years ago
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Location 🇨🇦 Canada
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qsm-tools

List of open-source quantitative susceptibility mapping (QSM) MRI software packages and data

Gold-Standard-Inversion-Recovery-T1-Mapping

Joelle Barral's gold standard inversion recovery T1 mapping package

deeplearning

Exercises that I wrote to supplement the Deep Learning (Goodfellow et al.) textbook during my read-through.

Sparse-VFA-T1-by-OMP

Sparse MRI Acquisition Variable Flip Angle (VFA) T1 Mapping using an Orthogonal Matching Pursuit (OMP) algorithm

matlab_tests

This repository provides a working example of Matlab's testing framework using classes.

orca-plotly-dockerfile

Dockerfile to run Plotly's Orca on MyBinder

Jupyter Notebook

qmt-optimization

Quantitative Magnetization Transfer MRI Optimization Toolbox

pyMincHeader

pyMincHeader is a tool to fetch mincheader information in python.

advent

Jupyter Notebook

StafferScraper

StafferScraper is a data mining python software

mrm_analysis

Jupyter Notebook

snakes

Snakes game written in P5.js

thesis

B1Paper_Analysis

BulgarianSolitaire

BulgarianSolitaire is a game simulator in python for the mathematical problem introduced by Martin Gardner in 1983.

Utility-Scripts

Collection of shell/bash scripts to improve my workflow

taylor_mechanics

Solutions to computer problems from the Classical Mechanics textbook by John R. Taylor

Jupyter Notebook

bloch-seg-pulse-tools

Some miscellaneous tools to generate Bloch-Siegert pulses and calculate the Kbs constant from a pulse file that was used during my PhD. *.pta files were for Siemens scanner, not sure if they are compatible with other vendors.

Airway-Diffusion-MRI-Simulations

Simulates MR diffusion of hyperpolarized gases (e.g. 129Xe) in a budded cylinder airway model using a finite difference method.