sinkovit/VDJfinder

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2
Language
Python
Created over 5 years ago
Updated about 5 years ago

sinkovit/VDJfinder

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Tools for finding V, D and J gene segments in Ig and TCR loci

PythonSeries

Jupyter Notebook

performance-tuning

Examples from performance tuning workshop

profiling-tutorial

Brief tutorial illustrating gprof and AMD uProf

Parallel-concepts

Illustration of parallel computing concepts such as Amdahl's law and presentation of scaling data

Jupyter Notebook

GibbsLDAPlusPlus

C/C++ implementation of Latent Dirichlet Allocation (LDA) using Gibbs Sampling technique for parameter estimation and inference.

Discrete-Math-Project

Collection of materials to help HS teachers of discrete math introduce technology into their classrooms

Jupyter Notebook

OpenMP-examples

OpenMP examples for parallel computing class

Rseries

Jupyter Notebook

k-components

Source and examples for identification of k-components in graphs

Linux-text-tools

Overview of Linux tools for file processing

Jupyter Notebook

Spatial-ecology

Space use software deployed in the Spatial Ecology Gateway

MHCII-processing

A collection of python utiliies for working with immunology genomics data

COMPLECS

HPC skills for end users

Jupyter Notebook

GamesOfChance

Jupyter Notebook

PavingPathways

Generalization of the paving pathways problem to pavers of any length

Jupyter Notebook

mkde