rdinnager/grambank_vae

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Language
R
License
MIT License
Created over 1 year ago
Updated 4 months ago

rdinnager/grambank_vae

rdinnager

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Code for running variational autoencoders on grambank data for ancestral character estimation.

trampoline

R package implementing generator based trampolines for deep recursive programming without overflowing the stack (a port of Python https://gitlab.com/ferreum/trampoline to R). Package webpage: https://rdinnager.github.io/trampoline/

impac

R package to create packed image mosaics (inspired by https://github.com/qnzhou/Mosaic)

greenpipeR

Level-up your pipes in R

slimr

Run and Analyse SLiM Population Genetics Forward Simulations from R.

rbff

R interface to Boundary First Flattening (BFF) software (https://geometrycollective.github.io/boundary-first-flattening/).

ecoevodynamo

R package for Eco-Evolutionary simulations using Automatic Differentiation

fibre

Flexible scalable phylogenetic trait models using integrated nested laplace approximation (INLA)

nichefillr

R package implementing niche filling simulations

rdinnager.github.com

Russell Dinnage's Open Science Notebook

styleganr

R implementation of StyleGAN3 (https://github.com/NVlabs/stylegan3) using torch package

deepbills

Project to analyse 3d bird bill morphology using deep learning

GlobalNfix

Project Repository for code relating to Global Nitrogen Fixation Distribution project.

rspektral

R wrapper for Keras extension spektral: https://github.com/danielegrattarola/spektral

slimr_workshop_CBA

Code for Centre for Biodiversity Analysis workshop on slimr package.

proteaceae_deep_learning

Code for playing around with and learning deep learning methods using images of Proteaceae from Australia

rngnet

Package for fitting Species Range Models (SRM) using deepSDF framework.

bigPD

Code for BigPD project (assembling massive phylogenies and calculating PD)

phyf

Tibble subclass and vctrs based phylogenetic data format to support phylogenetic modelling in {fibre}, inspired by {sf}

AFD-manuscript