orion-cirb/CFos_Granule_Cells2D orion-cirb/CFos_Granule_Cells2D

  • Stars
    star
    2
  • Language
    Java
  • Created almost 2 years ago
  • Updated 5 months ago
Twitter logo Share LinkedIn logo Share Facebook logo Share
orion-cirb/CFos_Granule_Cells2D
github

orion-cirb

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

In 2D images of granule cells, count nuclei and c-Fos-positive cells

More Repositories

1

QuPath_PAS_Intestine

Groovy
3
star
2

QuPath_Emeu

Groovy
2
star
3

Spheroid_Endothelium

Java
2
star
4

Stardist_Notebooks

Jupyter notebooks to train Stardist models
Jupyter Notebook
2
star
5

RNA_Scope_PV

IHC and RNA Scope
Java
2
star
6

QuPath_VacuolesInBundles

Groovy
2
star
7

QuPath_TUNEL

Groovy
2
star
8

Mito_Morph_Astro

Java
2
star
9

VeCell

Java
2
star
10

QuPath_Motoneurones

Groovy
2
star
11

Nuclei_ORF1P

Java
2
star
12

VGlut2_GluR2_GFP_Fiber

Java
1
star
13

QuPath_ORF1P

Jupyter Notebook
1
star
14

Vessel_IB4

Java
1
star
15

Astro_Oxytocin

Java
1
star
16

FrapFit

Java
1
star
17

NeuN_IBA1_Astro_Prots

Java
1
star
18

GFP_PV_PNN

Java
1
star
19

QuPath_DAB_Brain_Tumor

Groovy
1
star
20

PML_LiveCells

Java
1
star
21

Distribution_NileRed

Dots NileRed in oocytes - distribution
Java
1
star
22

PV_PNN_GFP

Java
1
star
23

ColocGenes2D

Java
1
star
24

Astro_FineProcessAnalysis

Java
1
star
25

GFAP_NeuN_IP3R1

Java
1
star
26

NeuN_CFos

Java
1
star
27

Lamin_ORF1P

Java
1
star
28

Nucleus_Forms

Java
1
star
29

Vessel_Scope_IB4

Java
1
star
30

3DSkel

MATLAB
1
star
31

Coloc_3DCells

Java
1
star
32

EDP_bacteriaDetection

Java
1
star
33

Mito_Morph

Java
1
star
34

Genes_2DCells

Java
1
star
35

AstroFineProcessStats

R
1
star
36

Emma_Bacteria

Java
1
star
37

DAPI_NEUN_ORF1P

Java
1
star
38

PML_Partners_FixedCells

Java
1
star
39

RNA_PECAM_DAPI

Java
1
star
40

Cadherin_Junctions

ImageJ Macro
1
star
41

Foci_in_bacteria

Java
1
star
42

Vessels_Microglia_Endothelium

Java
1
star
43

PML_FixedCells

Java
1
star
44

Astrocytes_InOut_Vessels

Java
1
star
45

DNA_PML_Morph

Java
1
star
46

MNP9_NeuN_PV

Java
1
star
47

Fly_Foci_Nucleus

Java
1
star
48

Astro_Dots_AI_Nucleus

Java
1
star
49

DNA_in_bacteria

Find DNA in bacteria
Java
1
star
50

Ovocyte_Nucleus

Java
1
star
51

QuPath_Megakaryocytes_Neutrophils

Groovy
1
star
52

Vglut_Psd95_Kir

Java
1
star
53

DNA_In_Border_Bacteria

Java
1
star
54

HA_ORF1P_Prot

Java
1
star
55

QuPath_DAB_Heart_Lung

Groovy
1
star
56

QuPath_Isolectine_Heart

Groovy
1
star
57

Astro_Dots

Java
1
star
58

qupath-extension-cellpose

Jupyter Notebook
1
star
59

Orion_QuPath_Scripts

Some QuPath useful scripts
Groovy
1
star
60

Orion_Macros

Some ImageJ/Fiji useful macros
ImageJ Macro
1
star
61

Vglut2_GFP_Weka_Maela

Java
1
star
62

Vglut2_GFP_Fibers

Java
1
star
63

JellyFish_Foci_Nucleus

Java
1
star
64

RNA_In_Astro_Vessels

Java
1
star
65

Vessels_Microglia

Java
1
star
66

Galanin_Mafa

Java
1
star
67

Th_Nucleus_Cytoplasm

Java
1
star
68

Linked_Cells

Java
1
star
69

Orion-Toolbox

Java
1
star
70

Vglut2_GFP_Weka_Shayan

Java
1
star
71

RNA_Scope_Nerve

Java
1
star
72

Spheroid_Expansion

Java
1
star
73

QuPath_Foci

Groovy
1
star
74

RNA_Scope

Java
1
star
75

Granule_Cells3D

In 3D images of granule cells, count nuclei
Java
1
star
76

SFPQ_Nuclei_Overlap

Java
1
star
77

Isolectin_Dextran

ImageJ Macro
1
star
78

Iba1

Java
1
star
79

DAPI_PML_RNF

Java
1
star
80

MNP9_NeuN_Astro

Java
1
star
81

Proteins_Segmentation

Java
1
star
82

bCat_pPAX

ImageJ Macro
1
star
83

Sox9_PV_CFos

Java
1
star
84

RNA_Scope_DAPI

Java
1
star
85

Gal_Mafa_CFos

Java
1
star
86

Hoechst_ORF1p_pTAU

Java
1
star